LBMC / RAPToRLinks
RAPToR (Real Age Prediction from Transcriptome staging on Reference) is a tool to accurately predict individual samples' developmental age from their gene expression profiles.
☆20Updated 2 years ago
Alternatives and similar repositories for RAPToR
Users that are interested in RAPToR are comparing it to the libraries listed below
Sorting:
- omics data analysis using clusterProfiler ;)☆15Updated last year
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated 2 years ago
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆22Updated last year
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Analysis and visualization of RNA-Seq results☆30Updated this week
- SCASA: Single cell transcript quantification tool☆22Updated 2 years ago
- Network construction Algorithm☆22Updated last year
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 7 months ago
- ☆20Updated 2 years ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- ☆17Updated 5 years ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆16Updated 6 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated last year
- Bead-based single-cell atac processing☆33Updated 4 years ago
- ChromSCape☆14Updated 4 months ago
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- Codes for our paper "Single-Cell RNA-Seq Reveals Dynamic Early Embryonic-like Programs during Chemical Reprogramming" published by Cell S…☆11Updated 5 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnr…☆15Updated 3 years ago
- VennDetail: a bioconductor package for VennDiagram visualization and details extraction☆30Updated 7 months ago
- ☆24Updated 4 years ago
- Docker container for genomics analyses in R.☆26Updated last year
- ☆23Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 8 months ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 3 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- binned motif enrichment analysis and visualisation☆43Updated last month