Cell Tracking metrics and tools for the CellTrackingChallenge as described in 'CHOTA: A Higher Order Accuracy Metric for Cell Tracking'
☆31Mar 12, 2026Updated 4 months ago
Alternatives and similar repositories for py-ctcmetrics
Users that are interested in py-ctcmetrics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆38Oct 10, 2024Updated last year
- Napari gaming☆17Dec 22, 2021Updated 4 years ago
- ☆22Jan 19, 2023Updated 3 years ago
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆41Updated this week
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- some useful function to get Label from ROIs and vice versa , and more!☆11May 3, 2023Updated 3 years ago
- pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-vali…☆16May 25, 2026Updated last month
- ☆32May 24, 2024Updated 2 years ago
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- ☆17Jul 30, 2024Updated last year
- Query Zarr stores with SQL directly from DuckDB☆19Jul 13, 2026Updated last week
- Source materials for a textbook on AI in Microscopy☆16Jul 14, 2026Updated last week
- Transformer-based cell tracking for live-cell microscopy☆137Updated this week
- Interactive visualization and sharing of cell tracking data in the browser☆48Jun 23, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆25May 30, 2025Updated last year
- ☆14Jan 10, 2025Updated last year
- Track cells and build cell lineages☆35Jun 4, 2026Updated last month
- Rxiv-Maker is a GitHub-native framework that converts markdown into a publication-ready PDF. It automates scientific preprint generation …☆39Jul 13, 2026Updated last week
- Multi-Object Tracking with Integer Linear Equations☆39Updated this week
- ☆14Mar 20, 2024Updated 2 years ago
- Cell tracking and segmentation software☆199Jul 15, 2026Updated last week
- Source Code for "Computer Vision Projects with PyTorch" by Akshay Kulkarni, Adarsha Shivananda, and Nitin Ranjan Sharma☆26Jul 6, 2022Updated 4 years ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated last month
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 10 months ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆56Updated this week
- Masked Auto-Encoding for Large Scale Pretraining of Video Data☆19Jun 9, 2023Updated 3 years ago
- Demonstration and tutorial notebooks for the Higra library☆13Sep 29, 2025Updated 9 months ago
- [ISBI 2025] Design Data Before Models: Using large vision-language models to automatically enhance medical dataset annotations.☆35Jan 28, 2026Updated 5 months ago
- ☆45Dec 24, 2024Updated last year
- Boundaries and Region Representation Fusion☆12Mar 24, 2023Updated 3 years ago
- Log-Polar Space Convolution for Convolutional Neural Networks☆13Dec 12, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Training and evaluation scripts for MALA (https://arxiv.org/abs/1709.02974).☆11Jun 23, 2021Updated 5 years ago
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 3 months ago
- Biological Relationships - Biorels data preparation infrastructure for biology and drug discovery☆16May 19, 2025Updated last year
- ☆10Apr 24, 2024Updated 2 years ago
- Offical Repo for Splitting Steepest Descent for Growing Neural Architectures☆13May 12, 2021Updated 5 years ago
- Energy-Aware Neural Architecture Optimization with Fast Splitting Steepest Descent☆14Feb 6, 2020Updated 6 years ago
- ☆33May 2, 2025Updated last year