lowe-lab-ucl / cellx-predictLinks
Explainable AI model of cell behavior
☆21Updated 2 years ago
Alternatives and similar repositories for cellx-predict
Users that are interested in cellx-predict are comparing it to the libraries listed below
Sorting:
- Track and lineage visualization with btrack and Napari☆46Updated last week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 7 months ago
- Optimize image processing workflows in napari☆18Updated 5 months ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated this week
- Tools for handling FIB-SEM data and annotations☆22Updated 6 months ago
- A napari plugin for clustering objects according to their properties.☆88Updated this week
- Transformer-based cell tracking for live-cell microscopy☆95Updated this week
- ☆32Updated 2 months ago
- scalable multiscale image pyramids in python☆29Updated last year
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- Gamified image segmentation quality estimation☆17Updated 5 months ago
- ☆22Updated 2 years ago
- Discover, install, and share napari plugins☆52Updated last week
- StarDist plugin for napari☆39Updated last year
- Python image segmentation plugin☆31Updated 4 years ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆40Updated 2 weeks ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated 2 months ago
- Process images using SimpleITK in napari☆22Updated 5 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆68Updated last year
- Multi-Object Tracker using Integer Linear Equations☆38Updated this week
- Particle tracking by solving linear assignment problem.☆57Updated this week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆54Updated 2 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated this week
- Napari gaming☆17Updated 3 years ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆56Updated 11 months ago
- Yet Another Pixel Classifier (based on deep learning)☆36Updated last year
- MorphoFeatures code and data☆22Updated 2 years ago
- simple package for augmentation of n-dimensional arrays☆33Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 2 months ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 5 months ago