lowe-lab-ucl / cellx-predictLinks
Explainable AI model of cell behavior
☆21Updated 2 years ago
Alternatives and similar repositories for cellx-predict
Users that are interested in cellx-predict are comparing it to the libraries listed below
Sorting:
- Tools for handling FIB-SEM data and annotations☆22Updated 8 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- MorphoFeatures code and data☆22Updated 2 years ago
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- A library to facilitate machine learning on multi-dimensional images.☆86Updated this week
- Python module for registering and fusing multi-view microscopy data☆24Updated 9 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 10 months ago
- ☆22Updated 2 years ago
- Multi-Object Tracker using Integer Linear Equations☆38Updated 3 weeks ago
- Optimize image processing workflows in napari☆17Updated 7 months ago
- simple package for augmentation of n-dimensional arrays☆34Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆87Updated this week
- Python image segmentation plugin☆31Updated 4 years ago
- scalable multiscale image pyramids in python☆29Updated last year
- Transformer-based cell tracking for live-cell microscopy☆119Updated this week
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated 4 months ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆45Updated last week
- A 3D interactivity toolbox for napari☆37Updated 5 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- Discover, install, and share napari plugins☆54Updated this week
- StarDist plugin for napari☆38Updated last year
- Tensorflow and Pytorch Version of Malis Loss☆17Updated 5 years ago
- 🌈☆66Updated 2 months ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆126Updated last year
- Block-wise task scheduling for large nD volumes.☆32Updated 8 months ago
- Gamified image segmentation quality estimation☆19Updated 7 months ago
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆36Updated 2 weeks ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆79Updated 4 months ago
- Block-wise operations for large nD volumes☆43Updated 2 weeks ago
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆24Updated last week