lowe-lab-ucl / cellx-predictLinks
Explainable AI model of cell behavior
☆20Updated 2 years ago
Alternatives and similar repositories for cellx-predict
Users that are interested in cellx-predict are comparing it to the libraries listed below
Sorting:
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 11 months ago
- Optimize image processing workflows in napari☆17Updated 9 months ago
- Tools for handling FIB-SEM data and annotations☆22Updated 10 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 4 months ago
- A library to facilitate machine learning on multi-dimensional images.☆87Updated last week
- ☆22Updated 7 months ago
- ☆22Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆90Updated 2 weeks ago
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆177Updated 3 weeks ago
- Transformer-based cell tracking for live-cell microscopy☆123Updated last week
- Gamified image segmentation quality estimation☆19Updated 9 months ago
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- Multi-Object Tracker using Integer Linear Equations☆38Updated last month
- scalable multiscale image pyramids in python☆29Updated last year
- Utilities for computing common accuracy metrics on cell tracking solutions with ground truth☆38Updated last week
- GPU-accelerated general purpose image processing and image analysis in napari☆36Updated 9 months ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 11 months ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆48Updated last week
- MorphoFeatures code and data☆22Updated 2 years ago
- Discover, install, and share napari plugins☆54Updated last week
- StarDist plugin for napari☆38Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 9 months ago
- Python image segmentation plugin☆31Updated 5 years ago
- Lazily load multiscale whole-slide images with openslide and dask☆34Updated 3 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆60Updated last month
- Particle tracking by solving linear assignment problem.☆61Updated last week
- ☆32Updated 6 months ago
- Napari gaming☆17Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- A self-supervised denoising algorithm.☆28Updated last year