This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise removal for microscopy and natural image datasets
☆35Nov 7, 2025Updated 5 months ago
Alternatives and similar repositories for HDN
Users that are interested in HDN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DivNoising is an unsupervised denoising method to generate diverse denoised samples for any noisy input image. This repository contains t…☆46Apr 16, 2025Updated 11 months ago
- MethodsJ2☆14May 6, 2022Updated 3 years ago
- Code Implementation for the publication "Fully Unsupervised Probabilistic Noise2Void"☆57Aug 28, 2023Updated 2 years ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆127Feb 14, 2024Updated 2 years ago
- A Board Game to teach co-localization analysis☆15Nov 1, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- This is the supplementary code for Dark sectioning. And it is private now☆37Oct 12, 2025Updated 6 months ago
- sciview is a tool for visualization and interaction with ND image and mesh data☆74Feb 26, 2026Updated last month
- Pytorch implementation of the LearnedRandomWalker module☆29Oct 28, 2020Updated 5 years ago
- Model repository for bioimage.io☆17Aug 7, 2023Updated 2 years ago
- Joint training of denoising and segmentation.☆76Aug 29, 2023Updated 2 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆20Feb 10, 2026Updated 2 months ago
- Deconvolution of widefield microscopy images and generation of point spread functions☆59Jan 8, 2026Updated 3 months ago
- ☆42Apr 1, 2026Updated last week
- ☆24May 30, 2025Updated 10 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- 3-day workshop to teach biologists how to train and process deep convolutional neural networks for image segmentation through a comprehen…☆12May 30, 2022Updated 3 years ago
- A deeplearning network based on Richardson-Lucy formula☆51Mar 22, 2023Updated 3 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆35Apr 9, 2020Updated 6 years ago
- QuickFigures is a toolset for creating scientific figures see publication for details☆37Feb 1, 2026Updated 2 months ago
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Sep 26, 2024Updated last year
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆35Mar 3, 2026Updated last month
- ☆12Dec 4, 2019Updated 6 years ago
- Behavioral Keypoint Discovery☆39Jun 13, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A virtual-scanning framework based on deep neural network for light-field microscopy (LFM)☆17Nov 11, 2023Updated 2 years ago
- Import Trackmate XML files in Python as Pandas dataframe☆12Mar 1, 2025Updated last year
- This is our implementation of Probabilistic Noise2Void☆77Aug 28, 2023Updated 2 years ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆90Mar 3, 2026Updated last month
- Experimental micro-service for implementing the Zarr spec over HTTP☆21Mar 16, 2026Updated 3 weeks ago
- TrackMate is your buddy for your everyday tracking.☆232Mar 25, 2026Updated 2 weeks ago
- Binary releases of Vaa3D and related software components☆45Nov 11, 2023Updated 2 years ago
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆128Updated this week
- Next generation of SuRVoS☆10Oct 11, 2023Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition☆30Apr 5, 2022Updated 4 years ago
- Public release of Monoqlo Python code☆10Apr 19, 2022Updated 3 years ago
- Files and assembly instructions for 3D printed microscopy imaging chambers. Work done by Ben Goodnow for Single Molecule Science at UNSW…☆25Mar 7, 2025Updated last year
- DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning☆127May 28, 2025Updated 10 months ago
- Notebooks for VoidSeg☆17Feb 10, 2020Updated 6 years ago
- ☆13Jun 6, 2024Updated last year
- This is the implementation of Noise2Void training.☆477Dec 18, 2024Updated last year