Alternatives and similar repositories for caleydo

Users that are interested in caleydo are comparing it to the libraries listed below

• YeoLab / flotilla
  Reproducible machine learning analysis of gene expression and alternative splicing data
  ☆125Updated 2 years ago
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 8 years ago
• FDA / fda-hive
  FDA High-performance Integrated Virtual Environment (HIVE)
  ☆38Updated last month
• boutroslab / HTSvis
  A web app for exploratory data analysis of high-throughput screens (HTS)
  ☆17Updated 7 years ago
• greenelab / continuous_analysis
  Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.
  ☆83Updated 4 years ago
• verilylifesciences / variant-qc
  Quality control methods for human genomic variants.
  ☆62Updated 3 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆48Updated this week
• CampagneLaboratory / NextflowWorkbench
  An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…
  ☆22Updated 9 years ago
• PMBio / limix-backup
  ☆45Updated 9 years ago
• kokrah / HTShape
  Shape analysis of high-throughput data
  ☆19Updated 9 years ago
• idekerlab / cyREST
  DEPRECATED. Please visit our new repository (cytoscape/cyREST)
  ☆27Updated 8 years ago
• ISA-tools / biopy-isatab
  Python parser for ISAtab, a biological file format for experimental metadata
  ☆16Updated 8 years ago
• snewhouse / enrichr-api
  python script to programmatically enrich your data using Enrichr API
  ☆12Updated 8 years ago
• hbc / NGS-Data-Analysis-long-course
  ☆11Updated 8 years ago
• cjprybol / reproducibility-via-singularity
  A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
  ☆26Updated 9 years ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• biomart / BioMart
  ☆21Updated 9 years ago
• StanfordBioinformatics / loom
  A tool for running bioinformatics workflows locally or in the cloud.
  ☆30Updated 5 years ago
• lucapinello / Haystack
  Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline
  ☆31Updated 8 years ago
• ialbert / pyblue-central
  Static website generator for sciencey people
  ☆30Updated last year
• wenjiegroup / PEDLA
  PEDLA: predicting enhancers with deep learning-based algorithmic framework
  ☆16Updated 9 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• VCG / upset
  UpSet - Visualizing Intersecting Sets
  ☆238Updated 3 years ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• skutac / InCHlib.js
  InCHlib (Interactive Cluster Heatmap library)
  ☆39Updated last year
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆17Updated 2 years ago
• BauerLab / VariantSpark
  VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information
  ☆33Updated 8 years ago
• pamelarussell / github-bioinformatics
  Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"
  ☆33Updated 6 years ago
• hacchy1983 / CWL-workflows
  Workflows written in common workflow language (CWL)
  ☆14Updated 6 years ago
• ypriverol / github-paper
  Plos in Computational Biology paper related with github for researchers, code, source and document
  ☆59Updated 9 years ago