idekerlab / cyREST
DEPRECATED. Please visit our new repository (cytoscape/cyREST)
☆28Updated 7 years ago
Alternatives and similar repositories for cyREST:
Users that are interested in cyREST are comparing it to the libraries listed below
- ☆43Updated 8 years ago
- GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge☆14Updated 7 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- ☆45Updated 8 years ago
- pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)☆49Updated 7 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆30Updated 7 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Stupid Simple Elastic Compute Cloud☆16Updated last year
- A collection of well-known bioinformatics programs.☆25Updated 9 years ago
- Response to blog post about Salmon☆37Updated 7 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Materials for GCB535 at Penn.☆20Updated 5 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 8 months ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆69Updated last year
- ☆11Updated 7 years ago
- Manage the visualization of large amounts of other people's [often messy] genomics data☆18Updated 8 years ago
- Library for manipulating genomic variants and predicting their effects☆82Updated 7 months ago
- Shape analysis of high-throughput data☆19Updated 8 years ago
- A versatile and efficient RNA-Seq read counting tool☆16Updated 8 years ago
- What's The Function of these genes?☆22Updated 7 years ago
- python script to programmatically enrich your data using Enrichr API☆12Updated 7 years ago
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Updated 6 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆45Updated last year
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆34Updated 2 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 2 years ago
- Flexible Integration of Data with Deep LEarning☆50Updated last year
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 8 years ago