Bioconductor / UseBioconductor
Training material for intermediate R / Bioconductor courses
☆17Updated last year
Alternatives and similar repositories for UseBioconductor:
Users that are interested in UseBioconductor are comparing it to the libraries listed below
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 7 months ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Archived version of RUVSeq☆8Updated 7 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- A python script used to annotate genomic intervals.☆18Updated 4 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆20Updated 4 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 5 years ago
- snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.☆18Updated 11 months ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 4 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- RNA-Seq Snakemake example with Jekyll homepage creation☆20Updated 10 years ago
- BigWig manpulation tools using libBigWig and htslib☆28Updated 5 months ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- ☆13Updated 7 years ago
- ☆24Updated 4 years ago
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆14Updated 10 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 8 years ago
- Short example showing how to calculate and plot a 2D t-SNE projection from mass cytometry data in R☆17Updated 9 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- Genetics training camp☆21Updated 4 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated last year
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 3 months ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated last month
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Examples of kallisto + sleuth☆11Updated 7 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago