Training material for intermediate R / Bioconductor courses
☆17Mar 15, 2023Updated 3 years ago
Alternatives and similar repositories for UseBioconductor
Users that are interested in UseBioconductor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 7 years ago
- Generate command line parser using getopt_long☆16Dec 11, 2024Updated last year
- Course material for introductory R / Bioconductor courses☆44Mar 15, 2023Updated 3 years ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- TFFM framework☆13Sep 22, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆21Apr 24, 2019Updated 7 years ago
- Bioconductor facilities for parallel evaluation☆69Apr 29, 2026Updated 3 weeks ago
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences…☆19Apr 15, 2026Updated last month
- ☆13Jun 24, 2016Updated 9 years ago
- Guide to transcriptome assembly & analysis☆21Apr 12, 2017Updated 9 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆19Oct 30, 2020Updated 5 years ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Feb 12, 2026Updated 3 months ago
- [DEPRECATED] Docker containers for Bioconductor☆49Mar 15, 2023Updated 3 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Single cell network synthesis toolkit☆23Feb 15, 2021Updated 5 years ago
- Epidemiological modeling framework for pathogen population genetics and evolution.☆19Oct 7, 2024Updated last year
- Fast but inaccurate adapter trimmer for Illumina reads☆16Mar 17, 2022Updated 4 years ago
- Fast Bayesian Hidden Markov Model with Wavelet Compression☆17Jan 24, 2020Updated 6 years ago
- ☆13Sep 22, 2017Updated 8 years ago
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- Bring Your Own Bioinformatics☆27Apr 28, 2016Updated 10 years ago
- useful functions for ggplot☆18Jul 16, 2025Updated 10 months ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Sep 4, 2017Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- example ruffus pipeline☆18Sep 30, 2011Updated 14 years ago
- Materials for a workshop on developing undergraduate classes on Bayesian statistics.☆47Jun 14, 2016Updated 9 years ago
- D Text User Interface library☆12Jun 28, 2019Updated 6 years ago
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Jan 29, 2026Updated 3 months ago
- A complete environment for Bayesian inference within R☆13Jul 29, 2016Updated 9 years ago
- Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data☆21Jul 13, 2021Updated 4 years ago
- Bayesian State Space and Dynamic Models☆34Dec 7, 2011Updated 14 years ago
- A small R package to make sequencing read coverage plots in R.☆42Apr 3, 2026Updated last month
- A neural network library based on tensorflow and with true sklearn compatibility.☆11Sep 17, 2016Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 'h'omeworks, 'a'ssignments 'tex' for courses at USC☆16May 4, 2020Updated 6 years ago
- ☆25Feb 24, 2026Updated 2 months ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Aug 17, 2016Updated 9 years ago
- An unofficial experimental port of the Google App Engine SDK to Python 3, using Managed VMs☆12Jan 13, 2015Updated 11 years ago
- Command line based todo list manager☆17Mar 22, 2017Updated 9 years ago
- MUMmer for HPC☆18Jan 7, 2013Updated 13 years ago
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jan 15, 2024Updated 2 years ago