Bioconductor / UseBioconductorLinks
Training material for intermediate R / Bioconductor courses
☆17Updated 2 years ago
Alternatives and similar repositories for UseBioconductor
Users that are interested in UseBioconductor are comparing it to the libraries listed below
Sorting:
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 3 weeks ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- A python script used to annotate genomic intervals.☆18Updated 5 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 2 months ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 8 years ago
- RNA-Seq Snakemake example with Jekyll homepage creation☆20Updated 11 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Genetics training camp☆21Updated 5 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- ☆26Updated 5 years ago
- Glimma R package☆50Updated last year
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- fast webservices based query tool for large sets of genomic features☆25Updated 7 months ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 9 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆39Updated 4 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆20Updated 5 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated last month
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Updated 6 years ago
- Materials for GCB535 at Penn.☆21Updated 6 years ago
- ☆35Updated 9 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 9 years ago
- Tools for next-generation sequencing analysis☆89Updated 6 years ago