Bioconductor / BiocParallel

Related projects ⓘ

Alternatives and complementary repositories for BiocParallel

• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆69Updated last week
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆36Updated last week
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆27Updated 4 years ago
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated last week
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆70Updated last year
• barkasn / fastSave
  Save and load your R sessions faster using parallel compression
  ☆23Updated 5 years ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆30Updated last week
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆45Updated last week
• stemangiola / tidySingleCellExperiment
  Brings SingleCellExperiment objects to the tidyverse
  ☆35Updated last month
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆56Updated 8 months ago
• Bioconductor / SummarizedExperiment
  A container (S4 class) for matrix-like assays
  ☆33Updated last week
• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆61Updated last week
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆50Updated 6 months ago
• Shians / Glimma
  Glimma R package
  ☆50Updated 2 months ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆40Updated 5 months ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆36Updated 2 months ago
• epurdom / clusterExperiment
  R package of techniques for comparing clusterings of single-cell sequencing data
  ☆37Updated 6 months ago
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆35Updated last year
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆59Updated this week
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated last year
• nickjer / singularity-rstudio
  RStudio Server in a Singularity container
  ☆54Updated 3 months ago
• Bioconductor / IRanges
  Foundation of integer range manipulation in Bioconductor
  ☆22Updated last week
• Bioconductor / BiocIntro
  Course material for introductory R / Bioconductor courses
  ☆44Updated last year
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆88Updated 3 weeks ago
• stephaniehicks / bioconductorNotes
  My notes/usage examples for various Bioconductor packages
  ☆15Updated 7 years ago
• stemangiola / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆25Updated 5 months ago
• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆21Updated 4 years ago
• hansenlab / minfi
  Devel repository for minfi
  ☆59Updated 6 months ago
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆55Updated 5 months ago
• Bioconductor / bioconductor_full
  [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages
  ☆25Updated last year