Fast Bayesian Hidden Markov Model with Wavelet Compression
☆17Jan 24, 2020Updated 6 years ago
Alternatives and similar repositories for HaMMLET
Users that are interested in HaMMLET are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 8 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Aug 17, 2016Updated 10 years ago
- TFFM framework☆13Sep 22, 2025Updated last year
- Training material for intermediate R / Bioconductor courses☆17Mar 15, 2023Updated 3 years ago
- STAT540 Statistical Methods for High Dimensional Biology, January - April 2014☆18Apr 28, 2014Updated 12 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Time series prediction using deep learning☆11Sep 16, 2021Updated 5 years ago
- SigMa is a probabilistic model for the sequential dependencies of mutation signatures☆17Jul 27, 2019Updated 7 years ago
- DACE: A Scalable DP-means Algorithm for Clustering Extremely Large Sequence Data☆10May 22, 2016Updated 10 years ago
- Applying Hidden Markov Models to model Gold Intraday Volatility by detecting regime switches from low-vol regimes to high-vol☆16Feb 17, 2021Updated 5 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Jul 31, 2017Updated 9 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 4 months ago
- Applied Quantitative Methods course at the College of Charleston☆21Apr 2, 2026Updated 5 months ago
- profile the repeat landscape in a genome☆16Sep 9, 2014Updated 12 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Fast but inaccurate adapter trimmer for Illumina reads☆16Mar 17, 2022Updated 4 years ago
- Location of structural errors in a genome assembly and structural variations between a pair of genomes☆11Sep 27, 2019Updated 6 years ago
- This is about spam classification using HMM model in python language☆19Nov 28, 2022Updated 3 years ago
- Genomic signature interpretation tool for DNA double-strand break repair mechanism☆11Oct 8, 2025Updated 11 months ago
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated last year
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 5 months ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆29Aug 21, 2018Updated 8 years ago
- A reverse engineering of Apple's Quartz Composer.☆13Sep 27, 2015Updated 10 years ago
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 11 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- C code to validate a fasta file☆14Mar 2, 2021Updated 5 years ago
- Snakemake library for bioinformatics programs, with a focus on next-generation sequencing☆22Feb 4, 2016Updated 10 years ago
- Bayesian State Space and Dynamic Models☆34Dec 7, 2011Updated 14 years ago
- A pipeline for whole genome assembly☆18Apr 21, 2022Updated 4 years ago
- EZW image codec according to Shapiro's paper, "Embedded Image Coding Using Zerotrees of Wavelet Coefficients."☆10Jan 14, 2018Updated 8 years ago
- Compress/Encode Media Hundreds Of Times For Lossy Artifact Goodness!!!☆10Mar 19, 2018Updated 8 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 10 months ago
- OBS FFMpegInput Plugin☆15Apr 6, 2013Updated 13 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- 🔊Sound Ninja is an Open Source Soundboard App with modern design and maximal customizability. 🔊☆10Updated this week
- SNES roms sound ripper.☆14Oct 19, 2018Updated 7 years ago
- A lightweight threading library for microcontrollers☆14Oct 1, 2020Updated 5 years ago
- Reproduction of code described in the paper "Stock Market Prediction Based on Generative Adversarial Network" by Kang Zhang et al.☆28Jun 12, 2020Updated 6 years ago
- Export QuickTime Movies with Matlab☆15Apr 12, 2017Updated 9 years ago
- a fork of the gap-closing pipeline PBJelly☆15Jan 7, 2019Updated 7 years ago
- A non-parametric Bayesian approach to Hidden Markov Models☆88May 22, 2023Updated 3 years ago