Foundation of integer range manipulation in Bioconductor
☆23Oct 30, 2025Updated 4 months ago
Alternatives and similar repositories for IRanges
Users that are interested in IRanges are comparing it to the libraries listed below
Sorting:
- A container (S4 class) for matrix-like assays☆36Feb 5, 2026Updated last month
- A unified framework for working transparently with on-disk and in-memory array-like datasets☆28Oct 30, 2025Updated 4 months ago
- Foundation of vector-like and list-like containers in Bioconductor☆17Oct 30, 2025Updated 4 months ago
- Representation and manipulation of genomic intervals☆46Dec 8, 2025Updated 3 months ago
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects☆12Oct 30, 2025Updated 4 months ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15Apr 16, 2025Updated 11 months ago
- High-performance sparse data representation and manipulation in R☆11Mar 12, 2026Updated last week
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆28Mar 7, 2026Updated last week
- Efficient manipulation of biological strings☆66Mar 6, 2026Updated 2 weeks ago
- Bioconductor facilities for parallel evaluation☆69Oct 30, 2025Updated 4 months ago
- create lightweight docker image for an R package☆11Dec 15, 2019Updated 6 years ago
- Utilities for manipulating chromosome names, including modifying them to follow a particular naming style☆33Dec 4, 2025Updated 3 months ago
- R package with Classes and Methods for Fast Memory-Efficient Boolean Selections☆13May 6, 2025Updated 10 months ago
- An R package for multivariate adaptive shrinkage.☆94Nov 7, 2024Updated last year
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 4 years ago
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Mar 5, 2012Updated 14 years ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 3 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆11Mar 10, 2022Updated 4 years ago
- repo to explore spatial data in R/Bioconductor and Python☆12Dec 3, 2019Updated 6 years ago
- ☆13Jan 22, 2026Updated last month
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 5 years ago
- c++ library for representing and interacting the gated cytometry data structure☆14Jan 29, 2025Updated last year
- Query the gene models of a given organism/assembly☆27Oct 30, 2025Updated 4 months ago
- MATCHER (Manifold Alignment to Characterize Experimental Relationships) is an approach for integrating single cell transcriptomic and epi…☆23Jun 16, 2017Updated 8 years ago
- stageR package☆13Feb 28, 2023Updated 3 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 3 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Mar 15, 2023Updated 3 years ago
- ☆17Jul 3, 2018Updated 7 years ago
- Annotation of Genetic Variants☆30Dec 17, 2025Updated 3 months ago
- ☆15Feb 6, 2023Updated 3 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆66Aug 27, 2025Updated 6 months ago
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 3 years ago
- Identification of persistent local patterns in spatial omics data☆14May 6, 2025Updated 10 months ago
- A rapido and lightweight method for PGS computation☆14Feb 19, 2025Updated last year
- Clone of the Bioconductor repository for the TileDBArray package.☆11Jun 19, 2025Updated 9 months ago
- Various multi-trait association tests in R☆11Oct 30, 2018Updated 7 years ago
- Discovery of genetic variants with shared effect across multiple phenotypes from GWAS summary statistics☆14Oct 27, 2023Updated 2 years ago