Foundation of integer range manipulation in Bioconductor
☆24Aug 27, 2026Updated last month
Alternatives and similar repositories for IRanges
Users that are interested in IRanges are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A container (S4 class) for matrix-like assays☆39Oct 1, 2026Updated last week
- A unified framework for working transparently with on-disk and in-memory array-like datasets☆29Sep 30, 2026Updated last week
- Foundation of vector-like and list-like containers in Bioconductor☆18Sep 15, 2026Updated 3 weeks ago
- Representation and manipulation of genomic intervals☆47Sep 2, 2026Updated last month
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects☆12Apr 29, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15May 8, 2026Updated 5 months ago
- High-performance sparse data representation and manipulation in R☆13Sep 30, 2026Updated last week
- Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import☆31Apr 28, 2026Updated 5 months ago
- Efficient manipulation of biological strings☆70Sep 5, 2026Updated last month
- Bioconductor facilities for parallel evaluation☆69Apr 29, 2026Updated 5 months ago
- create lightweight docker image for an R package☆11Dec 15, 2019Updated 6 years ago
- R package with Classes and Methods for Fast Memory-Efficient Boolean Selections☆13May 6, 2025Updated last year
- An R package for multivariate adaptive shrinkage.☆101Nov 7, 2024Updated last year
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 5 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆12Mar 10, 2022Updated 4 years ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 3 years ago
- repo to explore spatial data in R/Bioconductor and Python☆12Dec 3, 2019Updated 6 years ago
- Query the gene models of a given organism/assembly☆26Aug 27, 2026Updated last month
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 9 years ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 6 years ago
- c++ library for representing and interacting the gated cytometry data structure☆14Jan 29, 2025Updated last year
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Mar 5, 2012Updated 14 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Minimum docker image to deploy a plumber app☆14Nov 19, 2018Updated 7 years ago
- MATCHER (Manifold Alignment to Characterize Experimental Relationships) is an approach for integrating single cell transcriptomic and epi…☆23Jun 16, 2017Updated 9 years ago
- stageR package☆13May 8, 2026Updated 5 months ago
- Clone of the Bioconductor repository for the TileDBArray package.☆11Apr 10, 2026Updated 5 months ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 3 years ago
- ☆17Jul 3, 2018Updated 8 years ago
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Mar 15, 2023Updated 3 years ago
- Annotation of Genetic Variants☆32Jul 28, 2026Updated 2 months ago
- ☆15Feb 6, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- High-Dimensional Undirected Graph Estimation☆13Jan 10, 2024Updated 2 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 3 years ago
- Functions for distance matrix objects in R.☆15Mar 9, 2026Updated 7 months ago
- Various multi-trait association tests in R☆11Oct 30, 2018Updated 7 years ago
- Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…☆76Jul 16, 2026Updated 2 months ago
- A rapido and lightweight method for PGS computation☆14Aug 20, 2026Updated last month
- Interface to 10x Genomics' 1.3 m single cell data set☆19Aug 2, 2018Updated 8 years ago