Alternatives and similar repositories for MatrixGenerics

Users that are interested in MatrixGenerics are comparing it to the libraries listed below

• waldronlab / GSEABenchmarkeR
  Reproducible GSEA Benchmarking
  ☆13Updated 4 months ago
• Bioconductor / S4Vectors
  Foundation of vector-like and list-like containers in Bioconductor
  ☆18Updated last week
• Bioconductor / DelayedArray
  A unified framework for working transparently with on-disk and in-memory array-like datasets
  ☆27Updated 2 weeks ago
• BiocPy / rds2py
  Read RDS files, in Python
  ☆26Updated last week
• b2slab / FELLA
  FELLA: an R package for Metabolomics data enrichment through diffusion
  ☆21Updated 4 years ago
• malhamdoosh / EGSEA
  This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.
  ☆10Updated last year
• Bioconductor / TENxBrainAnalysis
  R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics
  ☆12Updated 2 years ago
• tidyomics / tidyomicsBlog
  The blog of tidyomics
  ☆14Updated 2 months ago
• Bioconductor / bioc-run
  Helper script for bioconductor/bioconductor_docker
  ☆13Updated 6 months ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 5 years ago
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆21Updated 3 months ago
• dgrapov / CTSgetR
  R interface to Chemical Translation Service (CTS)
  ☆16Updated last year
• gexijin / iDEP-old-version
  iDEP: integrated Differential Expression & Pathway analysis
  ☆14Updated 6 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆23Updated last year
• lianos / sparrow
  Take command of your set enrichment analyses.
  ☆22Updated this week
• igordot / babelgene
  Gene orthologs for model organisms in a tidy data format
  ☆14Updated 2 years ago
• calico / impulse
  Fit phenomenological sigmoid and impulse curves with priors to improve interpretability
  ☆10Updated last year
• cole-trapnell-lab / cicero
  ☆12Updated last year
• Bioconductor / BiocStyle
  Issues and pull requests for BiocStyle should go here.
  ☆14Updated last month
• PhilBoileau / scPCA
  A toolbox for sparse contrastive principal component analysis
  ☆12Updated 7 months ago
• MSKCC-Epi-Bio / gnomeR
  Package to wrangle and visualize genomic data in R
  ☆26Updated 11 months ago
• biodatascience / compbio
  Introduction to Computational Biology
  ☆32Updated 10 months ago
• karissawhiting / cbioportalR
  R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
  ☆22Updated 10 months ago
• KlugerLab / oocPCA
  Out-of-Core Principal Component Analysis
  ☆19Updated 7 years ago
• lgatto / rols
  An R package to query EBI's Ontology Lookup Service (OLS)
  ☆11Updated last year
• Bioconductor / BiocParallel
  Bioconductor facilities for parallel evaluation
  ☆68Updated 2 weeks ago
• csoneson / iCOBRA
  Interactive benchmarking of ranking and assignment methods
  ☆16Updated 2 months ago
• Bohdan-Khomtchouk / shinyheatmap
  Web application for enormous biological heatmaps
  ☆66Updated 5 years ago
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆21Updated last week
• alpreyes / GENAVi
  ☆16Updated 5 years ago