Bioconductor / Biostrings

Related projects ⓘ

Alternatives and complementary repositories for Biostrings

• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆45Updated last week
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆20Updated 8 months ago
• nullranges / nullranges
  Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…
  ☆26Updated last year
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆27Updated 4 years ago
• Bioconductor / SummarizedExperiment
  A container (S4 class) for matrix-like assays
  ☆33Updated last week
• Bioconductor / Rsamtools
  Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
  ☆27Updated last week
• ELTEbioinformatics / mulea
  mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate
  ☆23Updated last month
• carpentries-incubator / bioc-project
  Introduction to the Bioconductor project
  ☆18Updated this week
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆24Updated 8 months ago
• stemangiola / tidySummarizedExperiment
  Brings SummarizedExperiment to the tidyverse
  ☆25Updated 5 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆55Updated last month
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆69Updated last week
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆35Updated 7 months ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆36Updated 2 months ago
• thelovelab / fishpond
  Differential expression and allelic analysis, nonparametric statistics
  ☆27Updated last year
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated last year
• tidyomics / tidy-genomics-talk
  ☆16Updated last year
• gosling-lang / grosling
  R interface to 'Gos'
  ☆35Updated last year
• barkasn / fastSave
  Save and load your R sessions faster using parallel compression
  ☆23Updated 5 years ago
• Bioconductor / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated last week
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆36Updated last week
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆30Updated last year
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆76Updated last month
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆19Updated 4 months ago
• Roleren / ORFik
  ☆32Updated this week
• neurogenomics / orthogene
  🧬 o r t h o g e n e 🧬✨✨✨✨✨✨✨ Interspecies gene mapping✨✨✨✨✨ 🦠 🔁 🌱 🔁 🌳 🔁 🍎 🔁 🍊 🔁 🪱 🔁 🪰 🔁 🐟 🔁 🦎 🔁 🐓 🔁 🦇 🔁 🐄 🔁 �…
  ☆40Updated 10 months ago
• datapplab / pathview
  pathway based data integration and visualization
  ☆37Updated 7 months ago
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆34Updated 8 months ago
• csoneson / treeclimbR
  ☆19Updated last week