Deep neural network for predicting methylation states of single cells
☆13Jan 19, 2017Updated 9 years ago
Alternatives and similar repositories for deepcpg_legacy
Users that are interested in deepcpg_legacy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Embed python in R☆11Sep 5, 2014Updated 12 years ago
- Sequential lm for methylation data☆10Jan 11, 2019Updated 7 years ago
- Git clone of the "multicore" SVN repo on rforge.net☆12Aug 24, 2012Updated 14 years ago
- A tutorial on breast cancer cell classification using deep learning in Tensorflow☆13Sep 21, 2017Updated 9 years ago
- streaming, flexible agglomerative clustering☆13Oct 29, 2014Updated 12 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A slimmed down version of scran, based on the C++ library of the same name.☆10Oct 15, 2024Updated 2 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Apr 19, 2022Updated 4 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61May 26, 2016Updated 10 years ago
- Workflows for comparative analyses of single-cell RNA sequencing data, migrated to the OSCA book.☆11May 15, 2019Updated 7 years ago
- Load numpy arrays and HDF5 files from VCF (variant call format)☆32Jun 27, 2017Updated 9 years ago
- A support vector machine for calling variants from next-gen sequencing data☆15Dec 12, 2013Updated 12 years ago
- utilities for indexing and sequence extraction from FASTA files☆59Jul 2, 2026Updated 4 months ago
- Machine Learning clASS☆16Nov 21, 2024Updated last year
- Deep Learning library for the Julia language☆16Jul 13, 2015Updated 11 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 📝 GitHub Activity Feed RStudio Addin☆14Jun 2, 2018Updated 8 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆12Mar 21, 2019Updated 7 years ago
- The repository is an R package about ensemble learning algorithms based on SVM for my Google Summer of Code 2015 project☆12Jun 5, 2024Updated 2 years ago
- Collections of Benchmarks of R☆11May 16, 2016Updated 10 years ago
- LEGACY: Git commands to keep a Git repository and Bioconductor SVN in sync☆10Oct 17, 2016Updated 10 years ago
- A course project that detect cells in image by a simple full convolution neural network. The project is driven by TensorFlow.☆20Jun 6, 2017Updated 9 years ago
- Python实现的Scheme方言，支持宏、continuation、lambda、各种基本类型等等，可以直接Python解释执行，也可以编译到JavaScript。编译到JS可以与JavaScript动态交互（互相调用）☆22Jun 24, 2013Updated 13 years ago
- Efficient stochastic gradient descent algorithms for the estimation of generalized matrix factorization models in R.☆13Dec 15, 2025Updated 10 months ago
- Lazy evaluated vectors using the ALTREP framework☆16Aug 1, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)☆49Mar 3, 2017Updated 9 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Nov 29, 2013Updated 12 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 7 years ago
- Dev repository for R package lazyarray: A lightning tool to lazy load Giga-Byte-level data into memory☆19Jun 21, 2023Updated 3 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Oct 23, 2026Updated last week
- Regularized Structural Equation Modeling☆16Jun 1, 2023Updated 3 years ago
- Benchmarks of the H2O Ensemble R interface (H2O 2.0).☆14Nov 4, 2020Updated 5 years ago
- Materials for the Wednesday Afternoon Machine Learning workshop☆19Jun 5, 2015Updated 11 years ago
- NLM Medical Text Indexer (MTI)☆10May 18, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A deep learning package for predicting TF binding☆43Jan 23, 2020Updated 6 years ago
- ☆11Apr 6, 2017Updated 9 years ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- ☆51Jun 26, 2018Updated 8 years ago
- Template to create python module including unit tests, Sphinx documentation and setup.☆20Feb 2, 2023Updated 3 years ago
- Countdown timer for R Markdown (like for presentations with exercise/break times)☆15Aug 15, 2019Updated 7 years ago
- ☆17Oct 20, 2017Updated 9 years ago