MoChA WDL pipelines
☆12Aug 20, 2025Updated last year
Alternatives and similar repositories for mochawdl
Users that are interested in mochawdl are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Some script and skills in Population Genetic analyzes☆26Jul 6, 2024Updated 2 years ago
- ☆13Apr 25, 2017Updated 9 years ago
- MOsaic CHromosomal Alterations (MoChA) caller☆94Aug 22, 2025Updated last year
- ☆13Apr 25, 2026Updated 6 months ago
- A tool to detect postzygotic single-nucleotide mosaicism from unpaired, trio, or paired samples.☆13Feb 23, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Mar 17, 2022Updated 4 years ago
- Easily GPU accelerate essential genomics analysis workflows, such as Germline, by using NVIDIA Parabricks.☆14May 8, 2026Updated 5 months ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- ☆16Sep 1, 2023Updated 3 years ago
- Compute mean telomere length from Whole Genome Sequencing data.☆15Feb 15, 2024Updated 2 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆18Oct 4, 2026Updated 3 weeks ago
- Detection and genotyping of structural variants☆24May 27, 2026Updated 5 months ago
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆14Oct 7, 2026Updated 3 weeks ago
- A library for the deconvolution of bulk cell samples using single-cell RNA expression data.☆23Nov 3, 2021Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Part1: fastq and bam processing and quality check. Part2: variant calling, filtering and annotation☆12Feb 2, 2024Updated 2 years ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 6 months ago
- ☆20Aug 25, 2026Updated 2 months ago
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 9 years ago
- A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expr…☆11Jan 20, 2022Updated 4 years ago
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆46Feb 20, 2025Updated last year
- xQTLbiolinks: an R package for integrative analysis with xQTL data☆18Jan 29, 2026Updated 9 months ago
- MultiSuSiE is a multi-ancestry extension of the Sum of Single Effects model☆23Sep 28, 2026Updated last month
- This repo is designed as a step-by-step tutorial to teach RNA-seq analysis☆20Dec 21, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Nextflow DSL2 pipeline to call variants on long read alignment.☆11Updated this week
- Phenome Exome Association and Correlation Of Key phenotypes☆36Aug 19, 2021Updated 5 years ago
- a gatk4 pipeline with NA12878 demo dateset ,conda environment used(no GPU)☆15Aug 28, 2019Updated 7 years ago
- Torrent Mapping Alignment Program☆20Mar 2, 2013Updated 13 years ago
- PCA for hidden variable inference in QTL mapping: an R package and tutorial☆24Jan 25, 2023Updated 3 years ago
- MCP server for rclone.☆13Feb 8, 2026Updated 8 months ago
- Quality control steps for GWAS☆27Aug 11, 2023Updated 3 years ago
- This is a Vim HTML compiler for validating against http://validator.nu.☆14Nov 28, 2017Updated 8 years ago
- 🍶 Genome assembly with short sequence reads☆28Sep 14, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- 套娃wiznote/wizserver docker image，快速生成支持https的镜像，省去部署nginx代理到容器的流程☆11May 9, 2020Updated 6 years ago
- Imputation workflow for low coverage whole genome sequencing data☆10Jan 8, 2025Updated last year
- Filters for Next Generation Sequencing☆13Oct 31, 2024Updated last year
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 8 months ago
- UMN tracker production software for Mu2e☆11Jan 29, 2025Updated last year
- Tissue-Gene Fine-Mapping☆30Mar 20, 2025Updated last year
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 11 months ago