is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
☆93Jul 23, 2026Updated this week
Alternatives and similar repositories for iskylims
Users that are interested in iskylims are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Baobab LIMS is an open-source laboratory information management system (LIMS)☆89Jun 30, 2022Updated 4 years ago
- Moved to: https://github.com/maxplanck-ie/parkour2☆32Aug 24, 2022Updated 3 years ago
- SENAITE Meta Package☆239Apr 4, 2025Updated last year
- Predicting oncogenic potential of gene fusions☆13Feb 13, 2016Updated 10 years ago
- HTML to PDF Rendering Engine for SENAITE☆22Jun 28, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML☆15Oct 30, 2024Updated last year
- ☆10Updated this week
- NiPTUNE. A Python library for NIPT analyses.☆11Nov 22, 2021Updated 4 years ago
- MISO: An open-source LIMS for NGS sequencing centres☆305Updated this week
- do some exercise☆15Dec 2, 2025Updated 7 months ago
- MetaLIMS, A Simple Open-Source Laboratory Information Management System for Small Metagenomic Labs☆59Oct 6, 2022Updated 3 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆14Jun 10, 2022Updated 4 years ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Feb 25, 2016Updated 10 years ago
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆18Sep 1, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Web based LIMS☆111Updated this week
- The Aquarium Lab Operating System☆68Dec 20, 2025Updated 7 months ago
- Visualisation application for Klebsiella genotypes generated by Kleborate.☆10Mar 10, 2026Updated 4 months ago
- R Package for Non Invasive Prenatal Testing (NIPT) analysis☆46Nov 5, 2019Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Apr 7, 2022Updated 4 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Sep 4, 2024Updated last year
- Open Source Web-based Laboratory Information Management System☆239Feb 16, 2026Updated 5 months ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Jul 30, 2020Updated 5 years ago
- ☆43Feb 9, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Framework to benchmark algorithms when detecting germline copy number variations (CNVs) from NGS data☆14Dec 24, 2024Updated last year
- BAM Statistics, Feature Counting and Annotation☆155Updated this week
- Processing and analysis of data coming from Illumina sequencing machines☆11Updated this week
- SENAITE LIMS extension for Health Care labs☆20Aug 22, 2021Updated 4 years ago
- ☆14Dec 13, 2023Updated 2 years ago
- Add functional variant annotation to MAF file☆11Nov 20, 2024Updated last year
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Nov 19, 2019Updated 6 years ago
- NGS duplicate marking☆20Apr 6, 2021Updated 5 years ago
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Aug 10, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Mar 5, 2025Updated last year
- Contains a set of Galaxy Tools mostly written by the Bioinformatics core at NML☆16Jun 12, 2026Updated last month
- LoFreq Star: Sensitive variant calling from sequencing data☆113Oct 16, 2025Updated 9 months ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆43Aug 17, 2021Updated 4 years ago
- A pipeline for Bacterial Whole genome sequence data analysis☆15Jul 24, 2022Updated 4 years ago
- Software program for checking sample matching for NGS data☆142Jun 20, 2024Updated 2 years ago
- Parkour2: Laboratory Information Management System 👩🏻🔬 🧬 👨🏽💻☆35Updated this week