OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.
☆102Jan 11, 2024Updated 2 years ago
Alternatives and similar repositories for onto_merger
Users that are interested in onto_merger are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NetworkX-based Python library for representing ontologies☆95Jul 12, 2023Updated 3 years ago
- A general purpose recommender metrics library for fair evaluation.☆278Aug 22, 2023Updated 2 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Feb 11, 2026Updated 5 months ago
- LogMap: An Ontology Alignment and Alignment Repair System☆155Updated this week
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆64Jul 16, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆54Jun 29, 2026Updated 3 weeks ago
- ☆19May 10, 2024Updated 2 years ago
- 📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology☆33Dec 16, 2019Updated 6 years ago
- TigerLily: Finding drug interactions in silico with the Graph.☆100Dec 17, 2022Updated 3 years ago
- Semantic prefix map registry☆14Jul 2, 2026Updated 3 weeks ago
- Runtime support for linkml generated models☆45Dec 10, 2025Updated 7 months ago
- 🎡 Unified access to OLS instances like from the EBI and TIB☆14Apr 20, 2026Updated 3 months ago
- python based YAML-to-OWL-converter☆18May 20, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- python library for working with ontologies and ontology associations☆133Feb 11, 2025Updated last year
- 👁️🗨️ Scientists often do the same bad stuff. Automate giving deterministic feedback during peer review with determinstic (LLM-free)☆32May 9, 2025Updated last year
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Jan 8, 2026Updated 6 months ago
- 🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python☆27Jul 3, 2026Updated 3 weeks ago
- 🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.☆41Sep 29, 2025Updated 10 months ago
- Source for lemon-model.net☆14Jan 27, 2022Updated 4 years ago
- A research library for automating experiments on Deep Graph Networks☆222Dec 16, 2025Updated 7 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆43Jun 19, 2026Updated last month
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆264Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A high-throughput ontology-based pipeline for data integration☆16May 17, 2023Updated 3 years ago
- Simple Standard for Sharing Ontology Mappings☆206May 28, 2026Updated 2 months ago
- Library of models for Protein Function prediction (part of the 18th top solution out of 1625 teams in CAFA5)☆20May 23, 2025Updated last year
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Mar 2, 2021Updated 5 years ago
- 🍇 GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluations☆637Feb 24, 2024Updated 2 years ago
- Accelerating Network Layouts Using Graph Neural Networks☆28Feb 20, 2023Updated 3 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated 2 years ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆206May 3, 2024Updated 2 years ago
- A collection of research papers and software related to explainability in graph machine learning.☆1,988Apr 4, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A cookiecutter for linkml projects. An equivalent of `linkml-ws new project-name`.☆26Oct 23, 2025Updated 9 months ago
- KGX is a Python library for exchanging Knowledge Graphs☆183Jul 21, 2026Updated last week
- Luzzu Quality Assessment Framework☆10Sep 20, 2021Updated 4 years ago
- Augmenty is an augmentation library based on spaCy for augmenting texts.☆156May 24, 2024Updated 2 years ago
- (Personalized) Page-Rank computation using PyTorch☆93Nov 30, 2022Updated 3 years ago
- StarGazer is a tool designed for rapidly assessing drug repositioning opportunities. It combines multi-source, multi-omics data with a no…☆40Aug 14, 2023Updated 2 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆104Apr 28, 2026Updated 3 months ago