OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.
☆102Jan 11, 2024Updated 2 years ago
Alternatives and similar repositories for onto_merger
Users that are interested in onto_merger are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NetworkX-based Python library for representing ontologies☆95Jul 12, 2023Updated 2 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Jan 17, 2024Updated 2 years ago
- A general purpose recommender metrics library for fair evaluation.☆278Aug 22, 2023Updated 2 years ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆63Updated this week
- LogMap: An Ontology Alignment and Alignment Repair System☆154Apr 29, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- DBCLS RDFizing database guidelines☆16Aug 31, 2024Updated last year
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- Network-based project to explore gene connectivity through biological scales☆24Oct 21, 2024Updated last year
- 🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python☆27Updated this week
- Grounding of biomedical named entities with contextual disambiguation☆53Jun 11, 2026Updated last week
- ☆19May 10, 2024Updated 2 years ago
- Multi-Hop Logical Reasoning in Knowledge Graphs☆20Mar 2, 2021Updated 5 years ago
- Software "Disease_ontologies_for_knowledge_graphs" - a knowledge base solution that uses Grakn core and disease ontologies cross-referenc…☆21Apr 16, 2021Updated 5 years ago
- ☆12Jul 11, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆76Updated this week
- TigerLily: Finding drug interactions in silico with the Graph.☆100Dec 17, 2022Updated 3 years ago
- Semantic prefix map registry☆14May 9, 2026Updated last month
- 🎡 Unified access to OLS instances like from the EBI and TIB☆14Apr 20, 2026Updated last month
- python based YAML-to-OWL-converter☆18May 20, 2022Updated 4 years ago
- Extension of LinkML runtime for converting instances of LinkML classes to OWL (classes or instances)☆21May 8, 2026Updated last month
- LLM-based ontological extraction tools, including SPIRES☆905Apr 7, 2026Updated 2 months ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Jan 8, 2026Updated 5 months ago
- 🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.☆41Sep 29, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BERTMap: A BERT-Based Ontology Alignment System☆72Apr 15, 2024Updated 2 years ago
- A research library for automating experiments on Deep Graph Networks☆222Dec 16, 2025Updated 6 months ago
- The SPARQL Anything Python library☆24Jun 23, 2025Updated 11 months ago
- A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of…☆261May 6, 2026Updated last month
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆42Apr 2, 2024Updated 2 years ago
- KGX is a Python library for exchanging Knowledge Graphs☆141Updated this week
- Simple Standard for Sharing Ontology Mappings☆202May 28, 2026Updated 3 weeks ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Mar 2, 2021Updated 5 years ago
- Library of models for Protein Function prediction (part of the 18th top solution out of 1625 teams in CAFA5)☆20May 23, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 🍇 GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluations☆635Feb 24, 2024Updated 2 years ago
- Accelerating Network Layouts Using Graph Neural Networks☆26Feb 20, 2023Updated 3 years ago
- Efficiently calculate 3D-features for quantitative structure-activity relationship approaches.☆74Feb 1, 2024Updated 2 years ago
- ☆16Jul 7, 2025Updated 11 months ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆201May 3, 2024Updated 2 years ago
- Augmenty is an augmentation library based on spaCy for augmenting texts.☆156May 24, 2024Updated 2 years ago
- A high-throughput ontology-based pipeline for data integration☆16May 17, 2023Updated 3 years ago