Recognize bio-medical entities from a text corpus
☆133Aug 11, 2023Updated 2 years ago
Alternatives and similar repositories for Bio-Epidemiology-NER
Users that are interested in Bio-Epidemiology-NER are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast, world class biomedical NER☆89Mar 4, 2025Updated last year
- ☆16Aug 8, 2022Updated 3 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Jul 12, 2021Updated 4 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆51Mar 6, 2025Updated last year
- ☆63Jul 4, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a customzable pipeline for information extraction☆18Mar 23, 2026Updated 3 weeks ago
- NERO-nlp is a PyPI package for biomedical Named Entity (Recognition) Ontology☆12Oct 1, 2020Updated 5 years ago
- Document Classification on COVID-19 Literature using the LitCovid collection and the Hedwig library.☆16Oct 26, 2024Updated last year
- Repository for "Condolence and Empathy in Online Communities", EMNLP 2020☆10Nov 9, 2020Updated 5 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆203Mar 28, 2024Updated 2 years ago
- Clinical NLP concept extraction of ADEs in the 2018 n2c2 Adverse Drug Events and Medication Extraction (Track 2). Includes data preproce…☆16Nov 21, 2020Updated 5 years ago
- Tools for curating biomedical training data for large-scale language modeling☆496Dec 9, 2024Updated last year
- TrialMatchAI aims to leverage large language models (LLMs) to streamline patient matching with clinical trials based on unique patient ch…☆19Feb 10, 2026Updated 2 months ago
- ☆12Feb 25, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆27Mar 10, 2025Updated last year
- Generation of synthetic artefacts / digital pathology☆15Jun 22, 2021Updated 4 years ago
- ORION is a tool that ingests datasets from diverse knowledge bases and transforms them into modular, interoperable knowledge graphs.☆17Apr 9, 2026Updated last week
- Bioinformatics'2020: BioBERT: a pre-trained biomedical language representation model for biomedical text mining☆2,196Aug 13, 2023Updated 2 years ago
- Streamlined Data Mapping to OMOP☆22Apr 8, 2026Updated last week
- Library for clinical NLP with spaCy.☆646Mar 31, 2026Updated 2 weeks ago
- This repository contains the formal syntax and valid example files for each computable language in the SNOMED CT Family of Languages.☆15Mar 30, 2023Updated 3 years ago
- Github repo for the Evaluation of ChatGPT Family of Models for Biomedical Reasoning and Classification, code and data | Paper: https://ar…☆14Apr 6, 2023Updated 3 years ago
- BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences☆612Aug 15, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The Snorocket Description Logic classifier for EL++ with concrete domains support☆24Oct 7, 2021Updated 4 years ago
- ☆13Aug 13, 2020Updated 5 years ago
- This repository contains 2nd place solution for the Computer Vision Contest "Game of Deep Learning" organised by Analytics Vidhya☆16Jul 3, 2019Updated 6 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Jul 25, 2024Updated last year
- This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…☆19Mar 26, 2024Updated 2 years ago
- Benchmark Datasets for BioNLP Tasks☆17May 7, 2025Updated 11 months ago
- ☆15Dec 20, 2020Updated 5 years ago
- Simple CLI frontend for flashcards-core☆12Jul 30, 2021Updated 4 years ago
- Medical Concept Annotation Tool☆530Jul 25, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆24Mar 17, 2026Updated last month
- A project for developing transformer-based models for clinical relation extraction☆131Aug 15, 2023Updated 2 years ago
- This repository contains the implementation of the paper: "Span Classification with Structured Information for Disfluency Detection in Sp…☆15Jun 6, 2023Updated 2 years ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆14Jan 10, 2021Updated 5 years ago
- INSPECT dataset/benchmark paper, accepted by NeurIPS 2023☆49May 20, 2025Updated 10 months ago
- Python scripts to parse Pokemon info from serebii.net☆10May 22, 2023Updated 2 years ago
- Notebook for BERT medical named entity recognition☆44Sep 25, 2022Updated 3 years ago