pathology-dynamics / biomedical-entity-linking
☆13Updated last week
Alternatives and similar repositories for biomedical-entity-linking:
Users that are interested in biomedical-entity-linking are comparing it to the libraries listed below
- Biomedical Entity Linking Benchmark☆11Updated 2 months ago
- Grounding of biomedical named entities with contextual disambiguation☆41Updated 3 months ago
- ☆65Updated 2 years ago
- Fast, world class biomedical NER☆81Updated 2 months ago
- Data structures and code to read/write BioC XML and Json.☆31Updated last year
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆25Updated last month
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆183Updated last year
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- AIONER☆49Updated 6 months ago
- Python library for converting between BioNLP formats☆21Updated last year
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 2 years ago
- ☆14Updated 2 years ago
- Bio relation extraction labeled dataset☆43Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Text annotation tool for team collaboration☆40Updated last year
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Weakly supervised medical named entity classification☆70Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 9 months ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆35Updated last year
- ☆91Updated 5 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆163Updated last year
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- ☆52Updated 4 years ago
- EMNLP 2022: Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework☆10Updated 5 months ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆55Updated last year
- a module to calculate the MeSH similarity☆24Updated 3 years ago
- A near real-time named-entity recognizer☆59Updated 8 months ago