emvolz-phylodynamics / mleskyLinks
☆11Updated 10 months ago
Alternatives and similar repositories for mlesky
Users that are interested in mlesky are comparing it to the libraries listed below
Sorting:
- Scalable relaxed clock phylogenetic dating☆27Updated 3 months ago
- ☆18Updated 2 months ago
- Estimating time trees from very large phylogenies☆28Updated last year
- Coalescent simulation and likelihood for phylodynamic inference☆14Updated 7 months ago
- ☆19Updated 4 years ago
- Phylodynamic inference☆21Updated 5 years ago
- ☆19Updated last year
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆40Updated 2 weeks ago
- A versatile simulation engine for stochastic population dynamics models.☆23Updated 3 years ago
- Phylogenetic inference using Stan☆23Updated 9 months ago
- ☆20Updated 8 months ago
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Updated 2 years ago
- Reconstruction of transmission trees using genomic data☆69Updated 2 years ago
- ☆21Updated 3 weeks ago
- Bacterial phylogenetics in BEAST 2.☆18Updated 2 years ago
- Predicting Absolute and Relative Abundance by Modeling Efficiency to Derive Intervals and Concentrations☆14Updated last month
- Tutorial on Bayesian phylogenetic analysis☆51Updated 8 years ago
- A repo with supplementary material for a manuscript on the origin of SARS-CoV-2 origins☆11Updated 5 years ago
- R We There Yet?☆32Updated 9 months ago
- Quality control for phylogenetic analyses☆13Updated 3 weeks ago
- Plot microbiome time series in parallel☆27Updated 2 years ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated last year
- Population and Evolutionary Genetics Analysis System☆29Updated 3 weeks ago
- ☆12Updated 6 years ago
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Updated 8 years ago
- Metagenomics calibration R package☆20Updated 3 years ago
- ALDEx_bioc is the working directory for updating bioconductor☆30Updated 7 months ago
- ☆16Updated this week
- Working with the outputs of sourmash in R☆28Updated 2 years ago
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆24Updated 3 years ago