AndersJing / RaptorX-SingleLinks
☆20Updated last year
Alternatives and similar repositories for RaptorX-Single
Users that are interested in RaptorX-Single are comparing it to the libraries listed below
Sorting:
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆59Updated 3 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆54Updated last month
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 weeks ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆33Updated 10 months ago
- Kuhlman Lab Installation of AlphaFold3☆26Updated 3 weeks ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆27Updated 4 months ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆34Updated 5 months ago
- ☆18Updated last month
- ☆26Updated 3 weeks ago
- ☆32Updated last year
- A command-line interface and Python library for generating AlphaFold3 input files.☆32Updated last month
- Physical energy function for protein sequence design☆30Updated 2 years ago
- Analysis of alphafold and colabfold results☆27Updated 3 weeks ago
- bakerlab pymol scripts☆23Updated 5 years ago
- Machine learning prediction of enzyme optimum pH☆41Updated last month
- Extension of ThermoMPNN for double mutant predictions☆34Updated 2 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆54Updated this week
- Modelling protein conformational landscape with Alphafold☆51Updated last week
- code for SeqDance/ESMDance, biophysics-informed protein language models☆37Updated 2 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated 3 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆57Updated 6 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆43Updated 6 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆48Updated 2 weeks ago
- ☆30Updated 9 months ago
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆36Updated 3 months ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆23Updated last year
- The official codebase of peptidy, a peptide processing tool for machine learning.☆31Updated last month
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆19Updated 2 months ago
- ☆19Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆29Updated 11 months ago