☆20May 7, 2024Updated last year
Alternatives and similar repositories for RaptorX-Single
Users that are interested in RaptorX-Single are comparing it to the libraries listed below
Sorting:
- ☆30Oct 20, 2023Updated 2 years ago
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- Graphical Representation of Ancestral Sequence Predictions☆12Mar 6, 2023Updated 2 years ago
- EPSAPG: An Extensive Protein Sequence Alignment Profiles Generator Pipeline Combining MMseqs2 and PSI-BLAST☆11Apr 4, 2024Updated last year
- ☆25Apr 26, 2023Updated 2 years ago
- a pipeline to cluster proteins into families☆10Apr 1, 2020Updated 5 years ago
- Note that current version does not include search of very large metagenome data. For some proteins, metagenome data is important. We will…☆99Jan 26, 2022Updated 4 years ago
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆78Sep 9, 2025Updated 5 months ago
- Public version for Distance-AF☆30Aug 17, 2025Updated 6 months ago
- BioSeq-BLM: a platform for analyzing DNA, RNA and protein sequences based on biological language models☆14Aug 21, 2022Updated 3 years ago
- This repository provides C++17 command-line tools for analyzing molecular structures by computing volumes, channels, cavities, and tunnel…☆14Jan 29, 2026Updated last month
- ☆16Oct 3, 2023Updated 2 years ago
- HydrAMP: a deep generative model for antimicrobial peptide discovery☆56Nov 26, 2024Updated last year
- ☆31Oct 26, 2021Updated 4 years ago
- Python Client Library for the G2P Portal API☆15Aug 14, 2025Updated 6 months ago
- ☆14Dec 21, 2021Updated 4 years ago
- Bib'23: Improved the Heterodimer Protein Complex Prediction with Protein Language Models☆15Dec 21, 2023Updated 2 years ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 2 years ago
- ☆13Aug 18, 2023Updated 2 years ago
- Deep residual neural network for protein contact/distance prediction developed by Xu group☆79Sep 13, 2020Updated 5 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆89Jun 18, 2021Updated 4 years ago
- [ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".☆30Aug 23, 2024Updated last year
- ☆16Dec 10, 2024Updated last year
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆19Jul 5, 2019Updated 6 years ago
- Repo to analyze population genetic data with many different methods☆15Oct 23, 2019Updated 6 years ago
- HMmer Based UndeRstandinG of gene clustERs☆15Feb 6, 2026Updated 3 weeks ago
- ☆18Jan 13, 2023Updated 3 years ago
- ☆209Apr 21, 2025Updated 10 months ago
- ☆17Dec 10, 2022Updated 3 years ago
- PHYLIP package starting with version 4.0a☆19Updated this week
- ☆17Feb 16, 2026Updated 2 weeks ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- A flow matching model for generating conformational ensembles of protein backbones.☆35Jan 7, 2026Updated last month
- ☆21Feb 25, 2025Updated last year
- Protein prediction models implemented with Modal☆30Feb 22, 2026Updated last week
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆50Oct 31, 2025Updated 4 months ago
- ☆117Jan 3, 2026Updated 2 months ago
- Rendering protein mutation movies from predicted 3D structures☆20Dec 7, 2023Updated 2 years ago
- Flow-matching for coarse graining of miniproteins.☆19Nov 18, 2022Updated 3 years ago