Spliced peptide identification from in vitro digestions of polypeptides with purified proteasomes
☆10Jun 28, 2024Updated last year
Alternatives and similar repositories for invitroSPI
Users that are interested in invitroSPI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 2 years ago
- Framework for building R interfaces to shell commands☆16Oct 12, 2020Updated 5 years ago
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- Documentation for PEP specification and all PEPkit software☆10Mar 25, 2026Updated 3 weeks ago
- A Thermo XCalibur Method (.meth) file reader, extracter, and converter command-line program for mass spectrometry researchers.☆13Jan 13, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Simplified script for applying the t-SNE diff method on high parameter flow cytometry data☆11Oct 31, 2023Updated 2 years ago
- Implementation of Wasserstein Generative Adversarial Networks using Tensorflow☆12Jul 25, 2018Updated 7 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16May 16, 2023Updated 2 years ago
- Use LSTM neural network for 1D distributional data prediction☆22Sep 29, 2022Updated 3 years ago
- A TensorFlow implementation of Capsule Network as described in the paper Dynamic Routing Between Capsules☆20Sep 7, 2020Updated 5 years ago
- Energetic GraphNeural Networks (EGNN) implementation based on Dirichlet Energy Constrained Learning.☆27Nov 1, 2021Updated 4 years ago
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Oct 6, 2020Updated 5 years ago
- This project is created by the Hao Lab at the Department of Chemistry & Biochemistry, University of Maryland, College Park, MD. This proj…☆33Nov 24, 2024Updated last year
- Discovery of conserved gene clusters in multiple genomes☆128Jan 16, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆33Aug 22, 2025Updated 7 months ago
- Advanced Julia for undergraduate physicists☆102Apr 8, 2021Updated 5 years ago
- ☆43Oct 20, 2023Updated 2 years ago
- Implementation of Siamese-Networks for One Shot Learning in TensorFlow 2.0☆41Apr 19, 2019Updated 6 years ago
- Graph Neural Network, Self-Supervised Learning, Contrastive Learning, RecSys, Transformer Papers Reading Notes.☆37Oct 11, 2023Updated 2 years ago
- Gradient gating (ICLR 2023)☆55May 11, 2023Updated 2 years ago
- A tool for computing the coding potential of RNA transcript sequences using deep learning classification model☆57Oct 11, 2022Updated 3 years ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆184Apr 5, 2026Updated last week
- ☆92Mar 27, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆89May 19, 2020Updated 5 years ago
- Tandem Mass Spectrum Prediction with Graph Transformers☆100Aug 26, 2024Updated last year
- Sequence Graph Transform☆109Apr 23, 2020Updated 5 years ago
- Reaction Network is a Python package for predicting likely inorganic chemical reaction pathways using graph theoretical methods. Project …☆124Feb 4, 2025Updated last year
- Python package to read and write R RData and Rds files into/from pandas dataframes. No R or other external dependencies required.☆336Updated this week
- Modelling the Language of Life - Deep Learning Protein Sequences☆122Sep 15, 2020Updated 5 years ago
- Extracts colors from various image types, plots treemaps and 3D scatterplots of color compositions, create color palettes.☆147Mar 3, 2026Updated last month
- Chunkwise Text-file Processing for 'dplyr'☆167Feb 5, 2026Updated 2 months ago
- ☆170Feb 28, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Language modeling of viral evolution☆150Mar 24, 2023Updated 3 years ago
- The uncompromising Snakemake code formatter☆188Apr 7, 2026Updated last week
- Official repo of the modular BioExcel version of HADDOCK☆234Updated this week
- Pytorch implementation of paper 'GraphSMOTE: Imbalanced Node Classification on Graphs with Graph Neural Networks' to appear on WSDM2021☆177Sep 14, 2023Updated 2 years ago
- Deep Averaging Networks☆239Jan 18, 2022Updated 4 years ago
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆241Mar 7, 2026Updated last month
- Official code repository of "BERTology Meets Biology: Interpreting Attention in Protein Language Models."☆305May 1, 2025Updated 11 months ago