Alternatives and similar repositories for modig

Users that are interested in modig are comparing it to the libraries listed below

• zuozhaorui / SWnet
  Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…
  ☆22Updated 4 years ago
• CSUBioGroup / DeepEP
  a deep learning framework for essential protein prediction
  ☆13Updated 2 years ago
• wind22zhu / BioMedR
  generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.
  ☆16Updated 6 years ago
• brandonsie / epitopefindr
  R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.
  ☆16Updated 5 months ago
• kenichi-shimada / shinyDepMap
  A shiny-based web tool for interactive analysis of DepMap data
  ☆24Updated 5 years ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆28Updated 10 months ago
• ucdavis-bioinformatics-training / 2018-June-RNA-Seq-Workshop
  Focused multi-day workshop covering the material needed for a successful RNA-Seq experiment.
  ☆16Updated 7 years ago
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆48Updated last year
• TomKellyGenetics / graphsim
  R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
  ☆24Updated 9 months ago
• Novartis / AEGIS
  MHC-II presentation predictor
  ☆13Updated 2 years ago
• erhard-lab / grandR
  R package for nucleotide conversion sequencing data analysis
  ☆16Updated 3 weeks ago
• singha53-zz / diablo
  DIABLO - an integrative multi-group, multi-dataset classification method
  ☆26Updated 6 years ago
• drgoulet / Codon-optimization
  Use machine learning to design codon-optimized DNA sequences for increased protein expression.
  ☆15Updated 3 years ago
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆16Updated 4 years ago
• chenhcs / DIFFUSE
  Deep learning based prediction of IsoForm FUnctions from Sequences and Expression
  ☆15Updated 6 months ago
• dmis-lab / moable
  Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding
  ☆14Updated 2 years ago
• deepclip / deepclip
  This repository contains all DeepCLIP Python code
  ☆11Updated last year
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 3 years ago
• marcottelab / protein_complex_maps
  Kdrew's scripts for handling protein complex map data
  ☆14Updated 8 months ago
• Jinyu2019 / Suppl-data-BBpaper
  The Supplementary data in the paper "A Survey and Systematic Assessment of Computational Methods for Drug Response Prediction"
  ☆12Updated 6 years ago
• TheJacksonLaboratory / PDX-Analysis-Workflows
  ☆12Updated 7 years ago
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 4 years ago
• MaayanLab / archs4py
  Python package to load and query ARCHS4 data
  ☆26Updated 6 months ago
• idekerlab / nest_vnn
  NeST-VNN repo
  ☆12Updated 7 months ago
• diegommcc / digitalDLSorteR
  digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data
  ☆15Updated last year
• PavlopoulosLab / NORMA
  Network annotation visualization
  ☆18Updated 8 months ago
• CCSB-DFCI / HuRI_paper
  Code for the analyses in the human reference interactome paper.
  ☆28Updated 3 years ago
• zhibinlv / iACP-DRLF
  Anti-Cancer Peptide Prediction with Deep Representation Learning Features
  ☆11Updated 5 years ago
• dphansti / CORAL
  ☆29Updated 3 years ago
• biomed-AI / scAdapt
  ☆10Updated 4 years ago