zjupgx / modigLinks
MODIG: Integrating Multi-Omics and Multi-Dimensional Gene Network for Cancer Driver Gene Identification based on Graph Attention Network Model
☆12Updated 2 years ago
Alternatives and similar repositories for modig
Users that are interested in modig are comparing it to the libraries listed below
Sorting:
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Updated 6 years ago
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆16Updated 2 months ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆21Updated 4 years ago
- Functional Embedding of Gene Signatures☆47Updated last year
- a deep learning framework for essential protein prediction☆13Updated 2 years ago
- MHC-II presentation predictor☆13Updated 2 years ago
- ☆27Updated 7 months ago
- Focused multi-day workshop covering the material needed for a successful RNA-Seq experiment.☆16Updated 7 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Updated 2 years ago
- In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data☆18Updated 7 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- Anti-Cancer Peptide Prediction with Deep Representation Learning Features☆11Updated 4 years ago
- Network annotation visualization☆18Updated 5 months ago
- R package for nucleotide conversion sequencing data analysis☆15Updated 8 months ago
- A shiny-based web tool for interactive analysis of DepMap data☆24Updated 4 years ago
- digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data☆14Updated last year
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 3 years ago
- Similarity search in heterogeneous knowledge graphs using meta paths.☆29Updated 2 years ago
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Updated 3 months ago
- Kdrew's scripts for handling protein complex map data☆14Updated 4 months ago
- ☆29Updated 3 years ago
- NeST-VNN repo☆12Updated 4 months ago
- The Supplementary data in the paper "A Survey and Systematic Assessment of Computational Methods for Drug Response Prediction"☆12Updated 6 years ago
- ☆20Updated 5 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Multi-omics biomarker discovery tool exploiting a gene-gene interaction network☆17Updated last year
- Predicting ncRNA-protein interaction using high-level features based on deep learning☆15Updated 5 years ago
- A deep learning-based lncRNA subcellular localization predictor☆16Updated 3 years ago
- Python package to load and query ARCHS4 data☆24Updated 3 months ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆26Updated 6 years ago