CSUBioGroup / DeepEPLinks
a deep learning framework for essential protein prediction
☆13Updated 2 years ago
Alternatives and similar repositories for DeepEP
Users that are interested in DeepEP are comparing it to the libraries listed below
Sorting:
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆31Updated 2 years ago
- [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction☆17Updated last year
- Graph Neural Networks for Drug Efficacy Prediction☆11Updated 3 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Updated 2 years ago
- ☆14Updated 3 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 4 years ago
- https://grasp.ufv.br/☆15Updated 2 years ago
- Drug-Target Interaction Prediction Using Convolutional Neural Networks By Images of Compounds☆10Updated 5 years ago
- a protein descriptor for site prediction☆16Updated 6 years ago
- ☆32Updated 7 years ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 3 months ago
- ☆20Updated 5 years ago
- KDS software for Kinase Drug Selectivity☆11Updated 2 years ago
- The Supplementary data in the paper "A Survey and Systematic Assessment of Computational Methods for Drug Response Prediction"☆12Updated 6 years ago
- Clustering tool for biomolecular structural ensembles and data in general.☆10Updated 5 years ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Updated 6 years ago
- ☆17Updated 3 years ago
- Bayesian Active Learning for Optimization and Uncertainty Quantification with Applications to Protein Docking☆13Updated 4 years ago
- ☆12Updated 4 years ago
- Protein common interface databases☆10Updated 6 years ago
- Implements the blood brain barrier score described in: J. Med. Chem. 2019, 62, 21, 9824-9836 (https://doi.org/10.1021/acs.jmedchem.9b0122…☆14Updated 5 years ago
- Pytorch implementation of Pocket2Drug: a generative deep learning model to predict binding drugs for ligand-binding sites.☆21Updated 3 years ago
- ☆57Updated 6 years ago
- Sequence-based protein solubility predictor☆11Updated 5 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆28Updated 3 years ago
- Materials for KDD2023 tutorial: Knowledge-augmented Graph Machine Learning for Drug Discovery: from Precision to Interpretability☆23Updated 2 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆34Updated 2 years ago
- ☆13Updated 6 years ago
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆16Updated 4 years ago
- This repository provides an implementation of the DTi2Vec tool, to identify Drug-Target interaction using network embedding and ensemble …☆12Updated 4 years ago