a deep learning framework for essential protein prediction
☆13Mar 24, 2023Updated 2 years ago
Alternatives and similar repositories for DeepEP
Users that are interested in DeepEP are comparing it to the libraries listed below
Sorting:
- dmne is an algorithm to learn node representations from multi-network data.☆14Aug 1, 2018Updated 7 years ago
- generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.☆16Oct 19, 2019Updated 6 years ago
- Synthetic Accessible Prediction of Organic Compounds based on Graph Attention Mechanism☆22Sep 22, 2023Updated 2 years ago
- ☆11May 3, 2022Updated 3 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- Target prediction☆13May 8, 2020Updated 5 years ago
- ☆18May 24, 2018Updated 7 years ago
- uPU, nnPU and PN learning with Extra Trees classifier.☆19Dec 2, 2024Updated last year
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Jan 30, 2023Updated 3 years ago
- ☆13Sep 4, 2021Updated 4 years ago
- ☆22Dec 15, 2022Updated 3 years ago
- Code available for the quantitative pharmacophores☆12Sep 7, 2022Updated 3 years ago
- An open source and modular workstation concept for life science automation☆20Dec 26, 2022Updated 3 years ago
- Python code to automatically interact with PDBePISA web server☆10Jun 27, 2022Updated 3 years ago
- A positive-unlabeled ensemble learning framework for disease gene prioritization.☆20Nov 10, 2025Updated 4 months ago
- ☆10Mar 10, 2023Updated 3 years ago
- Graph Neural Networks for Drug Efficacy Prediction☆11Sep 11, 2022Updated 3 years ago
- ☆13Jul 13, 2019Updated 6 years ago
- NMR Chemical Shifts from Molecular Dynamics Simulation☆14Sep 17, 2021Updated 4 years ago
- Communicative Subgraph Representation Learning for Multi-Relational Inductive Drug-Gene Interaction Prediction☆11Feb 21, 2023Updated 3 years ago
- Repo hosting the MetFrag website☆10Jan 24, 2025Updated last year
- Python API for Pharmer☆12Jun 14, 2019Updated 6 years ago
- Integrating Deep Neural Networks and Symbolic Inference for Organic Reactivity Prediction☆13Jan 8, 2022Updated 4 years ago
- ☆20Jan 31, 2021Updated 5 years ago
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- ☆13Dec 18, 2019Updated 6 years ago
- Optimization of binding affinities in chemical space for drug discovery☆36Jan 31, 2023Updated 3 years ago
- ☆24Dec 19, 2016Updated 9 years ago
- PyMOL Plugin for displaying polar contacts☆18Mar 11, 2019Updated 7 years ago
- An Integrative Drug Repurposing Pipeline using KNIME and Programmatic Data Access: A case study on COVID-19 Data☆15Sep 29, 2020Updated 5 years ago
- Public repository for the R package intRinsic☆14Dec 17, 2025Updated 3 months ago
- Molecular Visualization powered by Plotly☆18Aug 28, 2022Updated 3 years ago
- ☆11Mar 24, 2023Updated 2 years ago
- A bayesian retrosynthesis algorithm☆14Dec 16, 2020Updated 5 years ago
- This repo contains the collection of codes to find designer interfacial mutations☆17Sep 4, 2023Updated 2 years ago
- ChemoPy: freely available python package for computational biology and chemoinformatics.☆14May 30, 2021Updated 4 years ago
- ☆16Nov 11, 2022Updated 3 years ago
- MolDesigner: Interactive Design of Efficacious Drugs with Deep Learning (NeurIPS 2020 Demo)☆16Nov 27, 2020Updated 5 years ago
- An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs☆13Jun 28, 2024Updated last year