ucdavis-bioinformatics-training / 2018-June-RNA-Seq-WorkshopLinks
Focused multi-day workshop covering the material needed for a successful RNA-Seq experiment.
☆16Updated 6 years ago
Alternatives and similar repositories for 2018-June-RNA-Seq-Workshop
Users that are interested in 2018-June-RNA-Seq-Workshop are comparing it to the libraries listed below
Sorting:
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆16Updated last year
- ☆12Updated 6 years ago
- Collection of scripts for pre- and postprocessing neoantigen discovery calls.☆9Updated 5 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆3Updated last year
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- DIABLO - an integrative multi-group, multi-dataset classification method☆24Updated 6 years ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆31Updated last month
- VirusScan Pipeline☆11Updated 5 months ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- ☆13Updated 4 months ago
- digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data☆13Updated 8 months ago
- Multi-omics data normalisation, model fitting and visualisation.☆25Updated 2 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- Gene-level meta-analysis of high-throughput functional genomics (RNAi or CRISPR) screens.☆9Updated 8 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆26Updated 2 years ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆32Updated 4 months ago
- DEAPP shiny App☆30Updated 3 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆25Updated 10 months ago
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Updated last year
- Core utilities for single-cell RNA-seq☆12Updated 3 months ago
- ☆17Updated 2 weeks ago
- Omics data analysis☆15Updated 4 months ago
- R package for nucleotide conversion sequencing data analysis☆13Updated 5 months ago
- ☆13Updated 2 years ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆12Updated last year
- Next-generation sequencing analysis pipelines & scrips☆10Updated 4 years ago
- ☆16Updated 3 years ago