wind22zhu / BioMedRLinks
generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.
☆16Updated 6 years ago
Alternatives and similar repositories for BioMedR
Users that are interested in BioMedR are comparing it to the libraries listed below
Sorting:
- ☆29Updated 3 years ago
- Peptide library design☆23Updated 5 years ago
- ☆18Updated 6 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 8 months ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆14Updated 2 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- ☆12Updated last month
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated last month
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 3 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Updated 4 years ago
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Updated 3 years ago
- Metabolome Annotation Workflow☆26Updated last month
- Processing and analysis of proteomics data☆17Updated last month
- 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery☆37Updated last year
- ☆25Updated last year
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Updated 3 years ago
- Target prediction☆13Updated 5 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Updated 2 years ago
- ☆12Updated 3 years ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆19Updated 2 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Updated last year
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 3 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal…☆12Updated 2 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆12Updated 8 months ago
- Python package and command line tool for epitope prediction☆52Updated last year
- Long disorder consensus predictor☆17Updated 3 months ago