wind22zhu / BioMedR
generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.
☆16Updated 5 years ago
Alternatives and similar repositories for BioMedR:
Users that are interested in BioMedR are comparing it to the libraries listed below
- ☆28Updated 2 years ago
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Updated 2 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆18Updated last year
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated last month
- All the source code of MetDNA.☆17Updated 3 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 3 years ago
- R package for optimized LC-MS spectra processing☆25Updated last week
- ☆11Updated 2 years ago
- Peptide library design☆23Updated 4 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆28Updated 9 months ago
- Analysis platform for large-scale dose-dependent data☆25Updated 3 weeks ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆12Updated last year
- ☆16Updated 5 years ago
- MetNormalizer is used to normalize large scale metabolomics data.☆21Updated 4 years ago
- Model-based Analysis of Protein Degradability☆10Updated 3 years ago
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 2 years ago
- Convert MSP files into a database☆10Updated 4 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- 5-day workshop on Metabolomics and Data Analysis☆16Updated 5 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Updated last year
- ☆10Updated last year
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆20Updated 4 years ago
- python based queries for the proteomesoflife neo4j network database☆14Updated 4 years ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆85Updated last year
- Metabolome Annotation Workflow☆25Updated last year
- an accurate approach for predicting protein-protein affinity changes upon interfacial amino-acid mutations by combining physics and evolu…☆13Updated 2 years ago
- Python package and command line tool for epitope prediction☆51Updated 9 months ago
- ☆14Updated 2 years ago