wind22zhu / BioMedRLinks
generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions.
☆16Updated 5 years ago
Alternatives and similar repositories for BioMedR
Users that are interested in BioMedR are comparing it to the libraries listed below
Sorting:
- ☆29Updated 3 years ago
- Peptide library design☆23Updated 5 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆26Updated 2 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated 2 years ago
- ☆17Updated 6 years ago
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 3 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Updated last year
- 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery☆37Updated last year
- ☆11Updated 3 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆29Updated last year
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Updated 2 years ago
- Analysis platform for large-scale dose-dependent data☆25Updated this week
- Metabolome Annotation Workflow☆25Updated last year
- Collisional cross-section prediction for modified and multiconformational peptides☆13Updated 2 months ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆12Updated 6 months ago
- MetNormalizer is used to normalize large scale metabolomics data.☆22Updated 4 years ago
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated 6 months ago
- Target prediction☆12Updated 5 years ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆13Updated last year
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Updated 4 years ago
- Long disorder consensus predictor☆17Updated last month
- Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal…☆12Updated 2 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- R package for optimized LC-MS spectra processing☆25Updated 2 weeks ago
- Repo hosting the MetFrag website☆10Updated 8 months ago
- Python package and command line tool for epitope prediction☆52Updated last year
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆21Updated 7 years ago
- KDS software for Kinase Drug Selectivity☆11Updated 2 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 3 years ago