edamame-course / 2016-tutorialsLinks
repo for 2016 EDAMAME tutorials
☆11Updated 8 years ago
Alternatives and similar repositories for 2016-tutorials
Users that are interested in 2016-tutorials are comparing it to the libraries listed below
Sorting:
- Lecture on viral phylodynamics☆12Updated 3 years ago
- Modular snakemake workflow for assembly-based metagenomics☆10Updated 7 years ago
- Tools for extracting individual genomes from metagenomes☆17Updated last year
- Annotate your metagenome assemblies☆11Updated 6 years ago
- A Shotgun Metagenome Annotation Pipeline☆23Updated 8 years ago
- Snakemake-based amplicon processing protocol for 16S and ITS sequences.☆14Updated last year
- Analyze a set of genomes with the anvi'o pangenome pipeline☆17Updated last year
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Updated 6 years ago
- Interactive tools for metagenome visualization and binning in R☆28Updated 6 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆15Updated 3 years ago
- Strain resolved metagenome simulator☆13Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆20Updated 6 months ago
- Protocols, data and code associated with the MK-SpikeSeq method for quantifying the absolute abundances of microbiota samples☆13Updated 4 years ago
- ☆22Updated 2 years ago
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Updated 6 years ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 3 years ago
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Updated 9 months ago
- ☆27Updated last year
- Ebola virus surveillance☆16Updated 8 years ago
- multi-tool QC for minion data☆9Updated 7 years ago
- Tools for analyzing trees☆14Updated 2 months ago
- Phylogenetic Organization of Metagenomic Signals (POMS)☆19Updated 2 years ago
- tutorials for 2015 EDAMAME☆24Updated 7 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆31Updated last year
- FAST is an Amplicon Sequencing Toolbox v1.2☆9Updated 6 years ago
- Metagenomic species profiling with enhanced coverage of the human gut microbiome☆25Updated last year
- Strain Prediction and Analysis with Representative SEquence☆19Updated 6 months ago
- Scalable relaxed clock phylogenetic dating☆25Updated last year
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago