Data for book
☆63Aug 4, 2021Updated 4 years ago
Alternatives and similar repositories for compGenomRData
Users that are interested in compGenomRData are comparing it to the libraries listed below
Sorting:
- ☆33Aug 5, 2024Updated last year
- ☆382Sep 9, 2024Updated last year
- R-Ladies Dublin meetups slides and code☆12Feb 15, 2021Updated 5 years ago
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 7 years ago
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 5 years ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Dec 7, 2019Updated 6 years ago
- ☆13Apr 25, 2017Updated 8 years ago
- Tests Allelic Expression data for extreme imbalance w.r.t. population☆11Oct 8, 2021Updated 4 years ago
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated last month
- Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning☆64Aug 1, 2025Updated 7 months ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆20Nov 28, 2025Updated 3 months ago
- Snakemake pipeline for benchmarking read mappers☆16Dec 11, 2023Updated 2 years ago
- Collection of useful methods for single cell analysis☆15Aug 22, 2024Updated last year
- METAREP: JCVI Metagenomics Reports - an open source tool for high-performance comparative metagenomics☆26Mar 21, 2013Updated 12 years ago
- ☆19Jan 6, 2023Updated 3 years ago
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hub☆18Dec 11, 2025Updated 2 months ago
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 5 years ago
- inference of transcription factor activity at the single cell level☆24Dec 16, 2025Updated 2 months ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆38Feb 10, 2026Updated 3 weeks ago
- ☆16May 27, 2017Updated 8 years ago
- ☆18Apr 6, 2022Updated 3 years ago
- ☆19Jul 3, 2022Updated 3 years ago
- genomic alignment similarity search tool☆18May 15, 2025Updated 9 months ago
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆25Jul 31, 2023Updated 2 years ago
- ☆19Jul 8, 2021Updated 4 years ago
- Gene network analysis☆19Dec 2, 2022Updated 3 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Jul 6, 2020Updated 5 years ago
- Multi-Enrichment Analysis of Gene Set Enrichment Analysis Results☆26Updated this week
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- Gallery of examples using gt packages☆16Mar 11, 2019Updated 6 years ago
- Website for the precision medicine workshop☆46Feb 20, 2026Updated last week
- Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed in…☆90Mar 6, 2024Updated last year
- ☆23Jan 17, 2023Updated 3 years ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆29Jan 16, 2024Updated 2 years ago
- Shiny GUI application for genomics meta-analysis☆22Nov 4, 2020Updated 5 years ago
- Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub☆25Mar 26, 2022Updated 3 years ago
- Codon Usage Analysis and Prediction of Gene Expressivity☆23Jan 2, 2019Updated 7 years ago
- ☆61Mar 23, 2021Updated 4 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Nov 10, 2021Updated 4 years ago