PyGim is the first runtime framework to efficiently execute Graph Neural Networks (GNNs) on real Processing-in-Memory systems. It provides a high-level Python interface, currently integrated with PyTorch, and supports various GNN models and real-world input graphs. Described by SIGMETRICS'25 by Giannoula et al. (https://arxiv.org/pdf/2402.16731)
☆36Apr 23, 2025Updated last year
Alternatives and similar repositories for PyGim
Users that are interested in PyGim are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PIM-ML is a benchmark for training machine learning algorithms on the UPMEM architecture, which is the first publicly-available real-worl…☆29Jan 7, 2025Updated last year
- SimplePIM is the first high-level programming framework for real-world processing-in-memory (PIM) architectures. Described in the PACT 20…☆39Oct 23, 2023Updated 2 years ago
- NATSA is the first near-data-processing accelerator for time series analysis based on the Matrix Profile (SCRIMP) algorithm. NATSA exploi…☆17Jun 14, 2023Updated 3 years ago
- Scrooge is a high-performance pairwise sequence aligner based on the GenASM algorithm. Scrooge includes three novel algorithmic improveme…☆38Jun 23, 2023Updated 3 years ago
- AIM, A Framework for High-throughput Sequence Alignment using Real Processing-in-Memory Systems, Bioinformatics, btad155, https://doi.or…☆24Apr 12, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- GenStore is the first in-storage processing system designed for genome sequence analysis that greatly reduces both data movement and comp…☆15Apr 6, 2022Updated 4 years ago
- TransPimLib is a library for transcendental (and other hard-to-calculate) functions in general-purpose PIM systems, TransPimLib provides …☆15Apr 21, 2023Updated 3 years ago
- UPMEM LLM Framework allows profiling PyTorch layers and functions and simulate those layers/functions with a given hardware profile.☆43Jul 2, 2026Updated 3 months ago
- SparseP is the first open-source Sparse Matrix Vector Multiplication (SpMV) software package for real-world Processing-In-Memory (PIM) ar…☆79Jun 29, 2022Updated 4 years ago
- PrIM (Processing-In-Memory benchmarks) is the first benchmark suite for a real-world processing-in-memory (PIM) architecture. PrIM is dev…☆180Jun 8, 2026Updated 4 months ago
- A new DRAM substrate that mitigates the excessive energy consumption from both (i) transmitting unused data on the memory channel and (i…☆14Aug 23, 2024Updated 2 years ago
- ☆14Dec 20, 2024Updated last year
- New RowHammer mitigation mechanism that is area-, performance-, and energy-efficient especially at very low (e.g., 125) RowHammer thresho…☆17May 2, 2024Updated 2 years ago
- Examples of DPU programs using the UPMEM DPU SDK☆48Jan 30, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆27Nov 29, 2024Updated last year
- Source code & scripts for experimental characterization and demonstration of performing NOT and up to 16-input AND, NAND, OR, and NOR ope…☆16Apr 9, 2024Updated 2 years ago
- Source code for the software implementations of the GenASM algorithms proposed in our MICRO 2020 paper: Senol Cali et. al., "GenASM: A Hi…☆32Dec 19, 2022Updated 3 years ago
- GenDP: A Dynamic Programming Framework for Genome Sequencing Analysis☆17Jan 12, 2024Updated 2 years ago
- pLUTo is a DRAM-based Processing-using-Memory architecture that leverages the high density of DRAM to enable the massively parallel stori…☆20Jan 12, 2023Updated 3 years ago
- Source code for “Comprehensive Evaluation of GNN Training Systems: A Data Management Perspective” (VLDB 2024).☆15Apr 21, 2025Updated last year
- AirLift is a tool that updates mapped reads from one reference genome to another. Unlike existing tools, It accounts for regions not shar…☆28May 23, 2024Updated 2 years ago
- ☆21Jul 3, 2026Updated 3 months ago
- RawHash can accurately and efficiently map raw nanopore signals to reference genomes of varying sizes (e.g., from viral to a human genome…☆70Jan 1, 2026Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Processing-in Memory Architecture for Multiply-Accumulate Operations with Hybrid Memory Cube☆12Feb 13, 2017Updated 9 years ago
- ☆19Mar 4, 2025Updated last year
- DISTWAR atomic reduction optimization on "3D Gaussian Splatting for Real-Time Radiance Field Rendering".☆42Jan 16, 2024Updated 2 years ago
- Repository holding the code base to AC-SpGEMM : "Adaptive Sparse Matrix-Matrix Multiplication on the GPU"☆32Jul 7, 2020Updated 6 years ago
- ☆74Jan 23, 2021Updated 5 years ago
- ☆187Feb 1, 2025Updated last year
- Shouji is fast and accurate pre-alignment filter for banded sequence alignment calculation. Described in the Bioinformatics journal paper…☆19Jun 3, 2019Updated 7 years ago
- [VLDB'23] A Skew-Resistant Index for Processing-in-Memory☆29Jan 5, 2026Updated 9 months ago
- Apollo is an assembly polishing algorithm that attempts to correct the errors in an assembly. It can take multiple set of reads in a sing…☆28May 10, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- DRAM Bender is the first open source DRAM testing infrastructure that can be used to easily and comprehensively test state-of-the-art HBM…☆140Sep 4, 2026Updated last month
- A survey of manufacturer-provided DRAM operating parameters and timings as specified by DRAM chip datasheets from between 1970 and 2021. …☆11May 4, 2022Updated 4 years ago
- MultiPIM: A Detailed and Configurable Multi-Stack Processing-In-Memory Simulator☆58Jun 12, 2021Updated 5 years ago
- A sample kernel module showing the memory reordering.☆13May 30, 2020Updated 6 years ago
- Source code for the Shifted Hamming Distance (SHD) filtering mechanism for sequence alignment. Described in the Bioinformatics journal pa…☆36Mar 29, 2020Updated 6 years ago
- Source code for the architectural simulator used for modeling the PUD system proposed in our HPCA 2024 paper `MIMDRAM: An End-to-End Proc…☆33Sep 12, 2025Updated last year
- A collection of examples showcasing PyCDE and Mini RISC-V implementation.☆10Jul 23, 2026Updated 2 months ago