Alternatives and similar repositories for QUAIL:

Users that are interested in QUAIL are comparing it to the libraries listed below

• richardslab / Ei
  Data and code for the Effector index
  ☆13Updated 4 years ago
• Atkinson-Lab / Post-QC
  Post variant-calling QC pipeline for orienting cohort data with a reference file. Additional steps for merging and phasing with a referen…
  ☆10Updated 5 years ago
• bogdanlab / h2-GRE
  Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 20…
  ☆14Updated 5 years ago
• qlu-lab / X-Wing
  Cross-population weighting framework to improve genetic risk prediction in ancestrally diverse populations
  ☆16Updated 9 months ago
• FINNGEN / CS-PRS-pipeline
  PRS pipeline using PRS_CS
  ☆14Updated 2 months ago
• huwenboshi / s-ldxr
  Stratified squared trans-ethnic genetic correlation
  ☆12Updated 2 years ago
• immunogenomics / cov-ldsc
  ☆11Updated 2 years ago
• mikelove / mrlocus
  Older repo for MRLocus. See new website for software usage guide:
  ☆15Updated last year
• statgen / pheweb-rg-pipeline
  Genetic correlation calculation pipeline via summary statistics for PheWeb
  ☆13Updated 6 years ago
• omerwe / S-PCGC
  Heritability, genetic correlation and functional enrichment estimation for case-control studies
  ☆19Updated last year
• EmilMiP / LTFHPlus
  Implementation of LTFH++
  ☆10Updated 11 months ago
• JonJala / mama
  ☆17Updated 9 months ago
• lukejoconnor / SLD4M
  Software implementing stratified LD fourth moments regression.
  ☆10Updated 6 years ago
• Jmtorres138 / TACTICAL
  Tissue of ACTion scores for Investigating Complex trait-Associated Loci
  ☆13Updated 4 years ago
• xqwen / ptwas
  ☆17Updated 3 years ago
• masadler / DrugTargetMethodComparison
  ☆14Updated last year
• bogdanlab / RHOGE
  Estimate genetic correlation using predicted expression
  ☆22Updated 7 years ago
• astheeggeggs / UKBB_ldsc_r2
  genetic correlation between phenotypes in the UK biobank
  ☆12Updated last year
• RebeccaFine / benchmarker
  Benchmarking gene and variant prioritization algorithms for GWAS data
  ☆15Updated 5 years ago
• Nealelab / UKBB_ldsc_scripts
  Scripts used for generating Neale Lab UKB results
  ☆19Updated 2 years ago
• mturchin20 / bmass
  R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)
  ☆10Updated 4 years ago
• mancusolab / FactorGo
  Software to infer latent pleiotropic components from GWAS summary data
  ☆13Updated 3 months ago
• kjgleason / Primo
  Primo
  ☆16Updated 3 years ago
• opentargets / genetics-colocalisation
  Colocalisation pipeline for Open Targets Genetics
  ☆17Updated 3 years ago
• hailianghuang / FM-summary
  Fine-mapping method only using summary statistics
  ☆18Updated 9 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• RayDebashree / metaUSAT
  metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…
  ☆19Updated 3 years ago
• GRealesM / RapidoPGS
  A rapido and lightweight method for PGS computation
  ☆14Updated 2 months ago
• hakyimlab / mixqtl
  Total and allele specific read based cis-QTL, fine-mapping, and prediction
  ☆9Updated 4 years ago
• andreyshabalin / ramwas
  RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms
  ☆10Updated 3 years ago