A software to detect virome-wide integrations
☆13Jan 27, 2021Updated 5 years ago
Alternatives and similar repositories for VIcaller
Users that are interested in VIcaller are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- helixlife-WGCNA-2018 https://github.com/xndless/helixlife-WGCNA-2018.git☆13Oct 25, 2018Updated 7 years ago
- This is a Genome Annotation Framework developed with the goal of annotating VCF files (Exomes or Genomes) from patients with Mendelian Di…☆23May 16, 2026Updated 2 months ago
- ☆17Sep 9, 2020Updated 5 years ago
- structure detection program☆18Nov 20, 2024Updated last year
- Ultra-efficient taxonomic mapping of NGS data☆51Mar 26, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- python☆11Feb 17, 2025Updated last year
- BioPerl scripts and utilities☆11Sep 2, 2025Updated 11 months ago
- ☆11Sep 28, 2017Updated 8 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆21Sep 12, 2017Updated 8 years ago
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆13Jan 10, 2024Updated 2 years ago
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11May 19, 2020Updated 6 years ago
- Rank Aggregation Algorithms☆13Jul 22, 2014Updated 12 years ago
- A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.☆16Jul 7, 2022Updated 4 years ago
- ☆12May 20, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆61Jun 7, 2019Updated 7 years ago
- Multivariable Mendelian randomization to investigate the independent effects of smoking and alcohol on risk of head and neck cancer☆34Oct 13, 2020Updated 5 years ago
- Web Application Development with R Using Shiny - Third Edition, published by Packt☆12Apr 11, 2021Updated 5 years ago
- Tools for finding mobile element insertions from single-end datasets☆24Dec 14, 2019Updated 6 years ago
- ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data☆15Jan 22, 2026Updated 6 months ago
- Quantitative Genetics Tools for Mapping Trait Variation to Mechanisms, Therapeutics, and Interventions - Webinar Series☆29Jul 23, 2023Updated 3 years ago
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Apr 5, 2016Updated 10 years ago
- Share my knowledge, share my life.☆11Apr 5, 2018Updated 8 years ago
- Query language for filtering SAM/BAM reads☆31Oct 15, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Specific Transposable Element Aligner (HERV-K)☆16Sep 12, 2019Updated 6 years ago
- SigProfilerPlotting provides a standard tool for displaying all types of mutational signatures as well as all types of mutational pattern…☆53Feb 8, 2026Updated 6 months ago
- a pipeline for quantification of circular RNA.☆14May 7, 2017Updated 9 years ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 6 years ago
- Fast Training of Support Vector Machines for Survival Analysis☆11Dec 28, 2016Updated 9 years ago
- A detailed guide to analise and integrate small-RNASeq and RNASeq samples using miARma-Seq☆11Oct 16, 2019Updated 6 years ago
- The implementation of gradient boosting machine for concordance index learning.☆16Oct 8, 2013Updated 12 years ago
- ☆13Feb 27, 2020Updated 6 years ago
- highly-efficient & lightweight mutation signature matrix aggregation☆19Jan 12, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Persian (Farsi) text pre processing (normalize, number, punctuation, white space, stop word & ...)☆20Jan 8, 2023Updated 3 years ago
- Next-Generation Sequencing(NGS) toolkits.☆48May 5, 2016Updated 10 years ago
- Machine Learning in NeuroImaging (MALINI) is a MATLAB-based toolbox used for feature extraction and disease classification using resting …☆24Jun 27, 2020Updated 6 years ago
- Bowtie2's manual in Chinese - Bowtie2中文使用手册☆12Nov 25, 2015Updated 10 years ago
- Implementation of Deep RL Algorithms for UC Berkeley's CS 294-112 (Fall 2018): Deep Reinforcement Learning☆24Feb 19, 2019Updated 7 years ago
- ☆16May 6, 2026Updated 3 months ago
- Murine version of MCP-counter, a tool to estimate the immune and stromal composition of heterogeneous tissue, from transcriptomic data☆12Jun 30, 2022Updated 4 years ago