R for Plant Breeding is open source resource to lear the Plant Breeding and Genetics related data analysis and visualizations
☆50Aug 29, 2025Updated last year
Alternatives and similar repositories for R-for-Plant-Breeding
Users that are interested in R-for-Plant-Breeding are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆38Feb 5, 2022Updated 4 years ago
- A R package for Participatory Plant Breeding statisticial analyses☆10Apr 30, 2021Updated 5 years ago
- Code for "Using machine learning to combine genetic and environmental data for maize grain yield predictions across multi-environment tri…☆22Jul 23, 2024Updated 2 years ago
- ☆17Oct 1, 2024Updated last year
- Course notes and scripts from ASReml-R short course taught by Salvador Gezan at the USDA-ARS station in Miami, FL☆13Jun 22, 2016Updated 10 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Modular Breeding Program Simulator☆46Feb 19, 2026Updated 6 months ago
- Separating the direct effects of risk factors for atherosclerotic cardiovascular disease from those mediated by type 2 diabetes☆17Mar 12, 2023Updated 3 years ago
- ☆28Sep 20, 2023Updated 2 years ago
- Draw genetic map (linkage map) in R☆14Nov 12, 2017Updated 8 years ago
- easyPheno: a model agnostic phenotype prediction framework☆16Nov 24, 2025Updated 9 months ago
- Multimodal Spatial-Omics Reveal Co-Evolution of Alveolar Progenitors and Proinflammatory Niches in Progression of Lung Precursor Lesions☆18Sep 18, 2025Updated 11 months ago
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Aug 6, 2023Updated 3 years ago
- ☆29Nov 22, 2020Updated 5 years ago
- Code for major analyses in "Spatially resolved multi-omics of human metabolic dysfunction-associated steatotic liver disease" paper by Zi…☆15Nov 25, 2025Updated 9 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- R package for breeding program simulations☆70Jul 24, 2026Updated last month
- ☆18Mar 17, 2022Updated 4 years ago
- An R package for conducting co-localization analysis. Edit☆26Jan 4, 2020Updated 6 years ago
- Mendelian Randomization Bayesian Model Averaging☆23Feb 21, 2023Updated 3 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Jan 21, 2026Updated 7 months ago
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated 2 years ago
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆22Jul 30, 2026Updated last month
- ☆12Apr 10, 2021Updated 5 years ago
- A comprehensive platform for population-scale genomic analyses☆10Apr 20, 2026Updated 4 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 庄闪闪的可视化笔记☆17Mar 24, 2026Updated 5 months ago
- Code for the spatial transcriptomic paper on IPF lungs☆24Jul 18, 2024Updated 2 years ago
- Heritability in plant breeding - R and SAS code examples☆41Aug 12, 2026Updated 2 weeks ago
- https://filippob.github.io/introduction_to_gwas/☆22Jun 8, 2026Updated 2 months ago
- Using genome-wide markers for polyploid breeding☆14May 2, 2026Updated 3 months ago
- A tool to visualize the haplotype pattern and various information in excel.☆25Mar 5, 2025Updated last year
- blupADC:An useful tool for animal and plant breeding☆32Nov 22, 2024Updated last year
- Implementation of joint bayesian model, written in python.☆11Aug 2, 2021Updated 5 years ago
- Design gene specific KASP and CAPS/dCAPS primers for any species☆19Sep 19, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code and Datasets for paper "Towards early detection of adverse drug reactions: combining pre-clinical drug structures and post-market sa…☆11Jun 3, 2021Updated 5 years ago
- R Package rrBLUP in Python☆26Mar 26, 2024Updated 2 years ago
- 公众号[庄闪闪的成长手册]对应的R资料(代码+数据)☆155Apr 14, 2024Updated 2 years ago
- ☆26Mar 6, 2026Updated 5 months ago
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆73Jun 7, 2026Updated 2 months ago
- ☆22Sep 22, 2022Updated 3 years ago
- Full GATK SNP calling pipeline☆24Oct 30, 2025Updated 9 months ago