igorkf / Maize_GxE_PredictionLinks
Code for "Using machine learning to combine genetic and environmental data for maize grain yield predictions across multi-environment trials" (Fernandes et. al 2024)
☆17Updated last year
Alternatives and similar repositories for Maize_GxE_Prediction
Users that are interested in Maize_GxE_Prediction are comparing it to the libraries listed below
Sorting:
- R package for fitting high-dimensional multivariate linear mixed effect models☆38Updated 4 months ago
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆112Updated this week
- Publication-quality sequence logos in R☆223Updated last year
- Make customized upset plots: from raw data to plots☆61Updated last month
- R package for breeding program simulations☆56Updated 2 weeks ago
- A simple gene co-expression analyses workflow powered by tidyverse and graph analyses☆207Updated last month
- ☆109Updated last week
- R package to create cell pictures.☆134Updated 2 years ago
- R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.☆120Updated 2 months ago
- This tutorial runs through the basics of ggplot2 and how to make a figure ready for publication.☆54Updated 5 years ago
- A grammar of genomic data transformation☆148Updated 3 months ago
- ☆85Updated last year
- Phylogenetic analysis in R☆209Updated this week
- quantitative PCR analysis in the tidyverse☆55Updated last year
- a complete reference book for treeio, tidytree and ggtree packages☆104Updated 3 years ago
- 𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …☆65Updated last month
- Visual self-service analytics platform for big omics data.☆125Updated last week
- colorblind friendly color palettes and ggplot2 graphic system extensions for publication-quality scientific figures☆120Updated 10 months ago
- 2018 Bioconductor Workshops☆76Updated 6 years ago
- [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data☆74Updated 3 months ago
- Tools to work with variant call format files☆262Updated 7 months ago
- ggplot2 version of heatmap☆90Updated 2 years ago
- RNA-seq workflow: exploratory analysis and differential expression☆80Updated last year
- A primer for computational tools to analyze genetics of populations in R☆88Updated 4 years ago
- Genomic Data Retrieval with R☆223Updated 2 months ago
- Efficient manipulation of biological strings☆65Updated 3 months ago
- Microbiome analysis☆53Updated last week
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆195Updated 3 weeks ago
- Documentation of ComplexHeatmap package☆25Updated 3 years ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆93Updated 3 weeks ago