High-Resolution Spatial Transcriptomics Using Histology Images with HisToSGE (Pathology Image Large Model, Transformers)
☆22Jul 24, 2024Updated 2 years ago
Alternatives and similar repositories for HisToSGE
Users that are interested in HisToSGE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Masked adversarial neural network for cell type deconvolution (MACD) in spatial transcriptomics data☆14Jun 16, 2025Updated last year
- ☆16May 27, 2024Updated 2 years ago
- scASDC is an attention enhanced structural deep clustering method for scRNA-seq cell clustering☆17Aug 8, 2024Updated 2 years ago
- Deep Clustering Representation for Spatially Resolved Transcriptomics Data via Multi-view Variational Graph Auto-Encoders with Consensus …☆15Jun 24, 2025Updated last year
- Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data☆19Aug 7, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Pretrained-Guided Masked Conditional Diffusion Models for Microbiome Data Analysis☆14Aug 7, 2024Updated 2 years ago
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆25Jun 2, 2026Updated 3 months ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- [Briefings in Bioinformatics 2025] A GCN and pathology image large model-based method to predict single-cell resolution spatial gene expr…☆27Dec 1, 2025Updated 9 months ago
- We propose SpatialCVGAE, which uses multiple variational graph autoencoders with different initializations to simultaneously generate cor…☆13Jun 24, 2025Updated last year
- A self-supervised learning method with Vision Transformer as backbone network for resolution enhancement in spatial transcriptomics.☆10Aug 25, 2025Updated last year
- [Advanced Science 2025] SpaBatch: Deep learning-based cross-slice integration and 3D spatial domain identification in spatial transcripto…☆21Jun 8, 2026Updated 3 months ago
- [PLoS Computational Biology 2025] SpaMask: Dual Masking Graph Autoencoder with Contrastive Learning for Spatial Transcriptomics☆13Apr 8, 2025Updated last year
- [PLoS Computational Biology 2025] Domain-Adversarial Masked Autoencoder (SpaDAMA) for cell type deconvolution in spatial transcriptomics …☆12Nov 6, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Transformer-based deep learning for spatial transcriptomics enhancement.☆12Mar 15, 2024Updated 2 years ago
- Identify spatial domain☆92May 29, 2025Updated last year
- Benchmarking clustering, alignment, and integration methods for spatial transcriptomics☆29Dec 19, 2024Updated last year
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆27Mar 13, 2024Updated 2 years ago
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆27Dec 11, 2024Updated last year
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- ☆10Apr 22, 2024Updated 2 years ago
- ☆11Sep 7, 2023Updated 3 years ago
- Colored Kimia Path24 Dataset: Configurations and Benchmarks with Deep Embeddings☆10Jun 6, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Source code from the book Machine Learning in Action, corrected the errors, updated according to python 3.X☆15Mar 3, 2019Updated 7 years ago
- ☆37Jul 18, 2025Updated last year
- Fast Semantic Segmentation Image Annotation with Segment Anything Model (SAM)☆14Mar 23, 2024Updated 2 years ago
- This is a thesis template for Yunnan University, which is suitable for master students! 这里是一个云南大学硕士毕业论文模板latex。该模板是根据其云南大学毕业模板要求撰写,分享供大家使…☆17Jul 26, 2018Updated 8 years ago
- Keras implementation of InfoGAN (work in progress)☆11May 25, 2017Updated 9 years ago
- ☆14May 28, 2025Updated last year
- ☆17Dec 19, 2025Updated 9 months ago
- EBStore dataset for "EMS: 3D Eyebrow Modeling from Single-view Images"(SIGGRAPH Asia 2023)☆16May 3, 2025Updated last year
- ☆17Feb 18, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Unsupervised Semantic Segmentation for Pathology☆17Nov 21, 2024Updated last year
- Spatial Expression-Aligned Learning to improve pathology foundation models☆49Feb 17, 2026Updated 7 months ago
- ☆21Oct 28, 2025Updated 10 months ago
- ☆23Oct 27, 2025Updated 10 months ago
- ☆173Dec 20, 2024Updated last year
- ☆11Aug 7, 2020Updated 6 years ago
- A novel spatial multi-modal omics framework, named PRototype-Aware Graph Adaptative aggregation (PRAGA) for spatial multi-modal omics ana…☆20May 29, 2025Updated last year