BCV-Uniandes / SpaREDLinks
☆14Updated 8 months ago
Alternatives and similar repositories for SpaRED
Users that are interested in SpaRED are comparing it to the libraries listed below
Sorting:
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆40Updated last year
- PyTorch implementation of HisToGene☆52Updated 4 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆83Updated last year
- ☆53Updated 3 years ago
- ☆79Updated 8 months ago
- ☆52Updated 10 months ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆128Updated 8 months ago
- Deep learning on histopathology images.☆140Updated 4 years ago
- ☆48Updated 8 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆114Updated last year
- Leveraging Digital Pathology Foundation Models to characterize the tumor microenvironment (TME)☆26Updated 2 months ago
- ☆13Updated 11 months ago
- Accurate spatial quantification in computational pathology with multiple instance learning☆26Updated 2 months ago
- A generative toolkit to translate H&E images to multiplexed IHC☆60Updated last year
- Her2 Breast Cancer Project☆92Updated 3 years ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated last year
- ☆57Updated 2 years ago
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆38Updated last year
- ☆27Updated 3 months ago
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆45Updated 9 months ago
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆36Updated 6 months ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆22Updated 10 months ago
- The official repo of "A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Model"☆41Updated 3 months ago
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆16Updated last year
- A biologically interpretable graph neural network for multistain computational pathology - CVPR 2025☆26Updated 8 months ago
- ☆30Updated last year
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆107Updated last month
- Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction☆18Updated 2 years ago
- Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching, ICML2025 (Spotlight)☆26Updated 5 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆113Updated 11 months ago