☆22Oct 28, 2025Updated last year
Alternatives and similar repositories for STimage
Users that are interested in STimage are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [ICLR 2026] Code for STAMP☆14Feb 27, 2026Updated 8 months ago
- ☆33Apr 29, 2026Updated 6 months ago
- [AAAI 2025] M2OST: Many-to-one Regression for Predicting Spatial Transcriptomics from Digital Pathology Images☆15Dec 1, 2025Updated 10 months ago
- A large scale benchmark for cross-modal learning of histology and spatial expressions☆24Oct 28, 2025Updated last year
- Leveraging Digital Pathology Foundation Models to characterize the tumor microenvironment (TME)☆38Sep 29, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- Code of the paper "DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images"☆15May 12, 2026Updated 5 months ago
- ☆11Jun 5, 2024Updated 2 years ago
- Gene Expression Prediction from Histology Images via Hypergraph Neural Networks☆18May 19, 2025Updated last year
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆104Updated this week
- ☆10Mar 10, 2026Updated 7 months ago
- Immunocto is a large immune cell database obtained from H&E whole slide images.☆15Dec 10, 2024Updated last year
- 肿瘤相关的数据集,包括但不限于影像、病理、细胞学、预后、多组学病理数据 【Oncology-related datasets, including but not limited to medical imaging, pathology, cytology, progno…☆14Jan 27, 2026Updated 9 months ago
- Vision-Language Fine-tuning with Pathology Reports | Conch-Z [Neurips 2026 Spotlight]☆22Oct 14, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Implementation of Seurat's SpatialFeaturePlot to allow blended expression☆11Feb 28, 2025Updated last year
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆26Oct 16, 2026Updated 2 weeks ago
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆54Jul 27, 2025Updated last year
- ☆12May 24, 2024Updated 2 years ago
- ☆13Feb 24, 2025Updated last year
- ☆14May 28, 2025Updated last year
- Highly accurate prediction of single-cell spatial transcriptomics from histology images☆37Oct 18, 2026Updated last week
- ☆16May 27, 2024Updated 2 years ago
- Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching, ICML2025 (Spotlight)☆38Aug 11, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Spatial transcriptomics foundation model based on Graph Transformer and JEPA☆74Aug 10, 2026Updated 2 months ago
- CellNeighborEX: Deciphering Neighbor-Dependent Gene Expression from Spatial Transcriptomics Data☆15Mar 13, 2026Updated 7 months ago
- ☆16Oct 16, 2026Updated last week
- ☆37Jul 18, 2025Updated last year
- ☆40Jun 11, 2026Updated 4 months ago
- ☆76Sep 16, 2025Updated last year
- PhiSpace for continuous phenotyping single-cell and spatial transcriptomics data☆18Oct 12, 2026Updated 2 weeks ago
- [MICCAI 2024] Official implementation of "Pathological Semantics-Preserving Learning for H&E-to-IHC Virtual Staining"☆46Apr 22, 2026Updated 6 months ago
- Quality control pipeline for human exome/genome cohorts☆10Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Multi-modal Spatial Omics☆18Dec 7, 2025Updated 10 months ago
- Fine-grained Spatial Transcriptomics by integrating paired histology image☆36Aug 7, 2026Updated 2 months ago
- Spatially-aware quality control for spatial transcriptomics☆17Oct 16, 2026Updated 2 weeks ago
- High-Resolution Spatial Transcriptomics Using Histology Images with HisToSGE (Pathology Image Large Model, Transformers)☆22Jul 24, 2024Updated 2 years ago
- [Nature Biomedical Engineering]This is the official code repo for the paper: spEMO: Exploring the Capacity of Foundation Models for Analy…☆22May 9, 2026Updated 5 months ago
- nnSVG: scalable method to identify spatially variable genes (SVGs) in spatially-resolved transcriptomics data☆25Jul 14, 2026Updated 3 months ago
- ☆11Feb 26, 2025Updated last year