☆16May 27, 2024Updated last year
Alternatives and similar repositories for STMask
Users that are interested in STMask are comparing it to the libraries listed below
Sorting:
- High-Resolution Spatial Transcriptomics Using Histology Images with HisToSGE (Pathology Image Large Model, Transformers)☆20Jul 24, 2024Updated last year
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆25Dec 12, 2025Updated 2 months ago
- Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data☆18Aug 7, 2024Updated last year
- Pretrained-Guided Masked Conditional Diffusion Models for Microbiome Data Analysis☆14Aug 7, 2024Updated last year
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆40Jan 10, 2025Updated last year
- We propose STG3Net, a novel method designed to integrate multiple SRT datasets and correct batch effects.☆14Aug 8, 2024Updated last year
- A self-supervised learning method with Vision Transformer as backbone network for resolution enhancement in spatial transcriptomics.☆10Aug 25, 2025Updated 6 months ago
- We propose SpatialCVGAE, which uses multiple variational graph autoencoders with different initializations to simultaneously generate cor…☆13Jun 24, 2025Updated 8 months ago
- [PLoS Computational Biology 2025] SpaMask: Dual Masking Graph Autoencoder with Contrastive Learning for Spatial Transcriptomics☆13Apr 8, 2025Updated 10 months ago
- Transformer-based deep learning for spatial transcriptomics enhancement.☆12Mar 15, 2024Updated last year
- ☆10Apr 22, 2024Updated last year
- PyTorch implementation for "Gated Transfer Network for Transfer Learning"☆11Jun 3, 2019Updated 6 years ago
- SAMatch： SAM-Guided and Match-based Semi-Supervised Segmentation for Medical Image☆13Jul 18, 2025Updated 7 months ago
- ☆11May 25, 2025Updated 9 months ago
- FGVC Aircraft dataset by classes folder☆13Nov 7, 2024Updated last year
- [AAAI 2025] M2OST: Many-to-one Regression for Predicting Spatial Transcriptomics from Digital Pathology Images☆14Dec 1, 2025Updated 3 months ago
- ☆17Jun 20, 2025Updated 8 months ago
- Gene Expression Prediction from Histology Images via Hypergraph Neural Networks☆15May 19, 2025Updated 9 months ago
- Code Repository for AAAI23 paper "Weakly-Supervised Semantic Segmentation for Histopathology Images Based on Dataset Synthesis and Featur…☆12Jun 23, 2024Updated last year
- ☆10Jun 9, 2023Updated 2 years ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆13Dec 13, 2024Updated last year
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆47Jul 16, 2024Updated last year
- Official code for "Shapley Values-enabled Progressive Pseudo Bag Augmentation for Whole-Slide Image Classification", IEEE Transaction on …☆14Jul 9, 2025Updated 7 months ago
- The source code for "High-Parameter Spatial Multi-Omics through Histology-Anchored Integration"☆27Jan 24, 2026Updated last month
- ☆13Feb 24, 2025Updated last year
- [CVPR 2025] Implementation of "Robust Multimodal Survival Prediction with Conditional Latent Differentiation Variational AutoEncoder"☆18Feb 3, 2026Updated last month
- Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching, ICML2025 (Spotlight)☆27Aug 11, 2025Updated 6 months ago
- This is a thesis template for Yunnan University, which is suitable for master students! 这里是一个云南大学硕士毕业论文模板latex。该模板是根据其云南大学毕业模板要求撰写，分享供大家使…☆16Jul 26, 2018Updated 7 years ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆22Mar 18, 2025Updated 11 months ago
- Pytorch code for the paper "Deep Interpretable Classification and Weakly-Supervised Segmentation of Histology Images via Max-Min Uncertai…☆19Aug 28, 2022Updated 3 years ago
- Source code from the book Machine Learning in Action, corrected the errors, updated according to python 3.X☆15Mar 3, 2019Updated 7 years ago
- ☆18Mar 20, 2023Updated 2 years ago
- Code for Variable Selection in Black Box Methods with RelATive cEntrality (RATE) Measures☆19Dec 2, 2020Updated 5 years ago
- ☆18Jun 2, 2023Updated 2 years ago
- Class Similarity Weighted Knowledge Distillation for Continual Semantic Segmentation☆18Jul 30, 2024Updated last year
- Identify spatial domain☆89May 29, 2025Updated 9 months ago
- ☆25Jun 27, 2024Updated last year
- ☆30Mar 15, 2024Updated last year
- Code for ICML 2022 paper "SPDY: Accurate Pruning with Speedup Guarantees"☆20May 3, 2023Updated 2 years ago