☆16May 27, 2024Updated 2 years ago
Alternatives and similar repositories for STMask
Users that are interested in STMask are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Masked adversarial neural network for cell type deconvolution (MACD) in spatial transcriptomics data☆14Jun 16, 2025Updated last year
- High-Resolution Spatial Transcriptomics Using Histology Images with HisToSGE (Pathology Image Large Model, Transformers)☆22Jul 24, 2024Updated 2 years ago
- scASDC is an attention enhanced structural deep clustering method for scRNA-seq cell clustering☆17Aug 8, 2024Updated 2 years ago
- Deep Clustering Representation for Spatially Resolved Transcriptomics Data via Multi-view Variational Graph Auto-Encoders with Consensus …☆15Jun 24, 2025Updated last year
- Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data☆19Aug 7, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆26Jun 2, 2026Updated 4 months ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- Pretrained-Guided Masked Conditional Diffusion Models for Microbiome Data Analysis☆14Aug 7, 2024Updated 2 years ago
- [Briefings in Bioinformatics 2025] A GCN and pathology image large model-based method to predict single-cell resolution spatial gene expr…☆27Dec 1, 2025Updated 10 months ago
- A self-supervised learning method with Vision Transformer as backbone network for resolution enhancement in spatial transcriptomics.☆10Aug 25, 2025Updated last year
- We propose SpatialCVGAE, which uses multiple variational graph autoencoders with different initializations to simultaneously generate cor…☆13Jun 24, 2025Updated last year
- [Advanced Science 2025] SpaBatch: Deep learning-based cross-slice integration and 3D spatial domain identification in spatial transcripto…☆22Jun 8, 2026Updated 4 months ago
- [PLoS Computational Biology 2025] Domain-Adversarial Masked Autoencoder (SpaDAMA) for cell type deconvolution in spatial transcriptomics …☆12Nov 6, 2025Updated 11 months ago
- Transformer-based deep learning for spatial transcriptomics enhancement.☆12Mar 15, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆17Dec 19, 2025Updated 9 months ago
- A tool for spatial omics single-modal clustering, multi-modal clustering, slice alignment, cross-modal alignment, multi-modal alignment, …☆22May 6, 2026Updated 5 months ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- ☆33Apr 29, 2026Updated 5 months ago
- ☆10Apr 22, 2024Updated 2 years ago
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆49Jul 16, 2024Updated 2 years ago
- ☆11Sep 7, 2023Updated 3 years ago
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆23Jan 9, 2026Updated 9 months ago
- ☆18Dec 7, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PyTorch implementation for "Gated Transfer Network for Transfer Learning"☆11Jun 3, 2019Updated 7 years ago
- [IJCAI'23] Prompt Federated Learning for Weather Forecasting: Toward Foundation Models on Meteorological Data.☆14Oct 3, 2024Updated 2 years ago
- ☆15Feb 27, 2026Updated 7 months ago
- ☆17Feb 18, 2025Updated last year
- ☆23Oct 28, 2025Updated 11 months ago
- Identify spatial domain☆92May 29, 2025Updated last year
- ☆23Oct 27, 2025Updated 11 months ago
- ☆10May 25, 2025Updated last year
- ☆11Jun 9, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for Modeling Annotator Preference and Stochastic Annotation Error for Medical Image Segmentation (MedIA 2023).☆10Nov 17, 2023Updated 2 years ago
- [ICASSP 2022] Official PyTorch Implementation for "Attention Probe: Vision Transformer Distillation in the Wild" (ICASSP 2022)☆11Jan 23, 2022Updated 4 years ago
- ☆26Jun 27, 2024Updated 2 years ago
- This is the PyTorch implementation of the paper ''STINR: Deciphering Spatial Transcriptomics via Implicit Neural Representation'' (CVPR 2…☆21Mar 26, 2025Updated last year
- SAMatch： SAM-Guided and Match-based Semi-Supervised Segmentation for Medical Image☆15Jul 18, 2025Updated last year
- Black-box Few-shot Knowledge Distillation☆14Jul 19, 2022Updated 4 years ago
- spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples☆35Aug 14, 2026Updated last month