We propose SpatialCVGAE, which uses multiple variational graph autoencoders with different initializations to simultaneously generate corresponding low-dimensional embeddings, and then utilizes consensus clustering.
☆13Jun 24, 2025Updated last year
Alternatives and similar repositories for SpatialCVGAE
Users that are interested in SpatialCVGAE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [PLoS Computational Biology 2025] SpaMask: Dual Masking Graph Autoencoder with Contrastive Learning for Spatial Transcriptomics☆13Apr 8, 2025Updated last year
- [PLoS Computational Biology 2025] Domain-Adversarial Masked Autoencoder (SpaDAMA) for cell type deconvolution in spatial transcriptomics …☆12Nov 6, 2025Updated 10 months ago
- [Advanced Science 2025] SpaBatch: Deep learning-based cross-slice integration and 3D spatial domain identification in spatial transcripto…☆21Jun 8, 2026Updated 3 months ago
- ☆16May 27, 2024Updated 2 years ago
- Masked adversarial neural network for cell type deconvolution (MACD) in spatial transcriptomics data☆14Jun 16, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- High-Resolution Spatial Transcriptomics Using Histology Images with HisToSGE (Pathology Image Large Model, Transformers)☆22Jul 24, 2024Updated 2 years ago
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆25Jun 2, 2026Updated 3 months ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- scASDC is an attention enhanced structural deep clustering method for scRNA-seq cell clustering☆17Aug 8, 2024Updated 2 years ago
- Masked Graph Autoencoders with Contrastive Augmentation for Spatially Resolved Transcriptomics Data☆19Aug 7, 2024Updated 2 years ago
- We propose STG3Net, a novel method designed to integrate multiple SRT datasets and correct batch effects.☆15Aug 8, 2024Updated 2 years ago
- Deep Clustering Representation for Spatially Resolved Transcriptomics Data via Multi-view Variational Graph Auto-Encoders with Consensus …☆15Jun 24, 2025Updated last year
- Transformer-based deep learning for spatial transcriptomics enhancement.☆12Mar 15, 2024Updated 2 years ago
- Pretrained-Guided Masked Conditional Diffusion Models for Microbiome Data Analysis☆14Aug 7, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [Briefings in Bioinformatics 2025] A GCN and pathology image large model-based method to predict single-cell resolution spatial gene expr…☆27Dec 1, 2025Updated 9 months ago
- ☆33Apr 29, 2026Updated 4 months ago
- Benchmarking clustering, alignment, and integration methods for spatial transcriptomics☆29Dec 19, 2024Updated last year
- Dual-attention Enhanced Spatial Transcriptomics Denoiser☆13May 8, 2025Updated last year
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- ☆10Apr 22, 2024Updated 2 years ago
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆48Jul 16, 2024Updated 2 years ago
- ☆11Sep 7, 2023Updated 3 years ago
- Source code from the book Machine Learning in Action, corrected the errors, updated according to python 3.X☆15Mar 3, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- This is a thesis template for Yunnan University, which is suitable for master students! 这里是一个云南大学硕士毕业论文模板latex。该模板是根据其云南大学毕业模板要求撰写,分享供大家使…☆17Jul 26, 2018Updated 8 years ago
- ☆17Dec 7, 2023Updated 2 years ago
- For further understanding the wide array of emotions embedded in human speech, we are introducing an emotional speech corpus. In contrast…☆11Oct 29, 2018Updated 7 years ago
- 主要是用python进行生存分析的步骤,包括生存分析(逐步和单因素),KM曲线、决策曲线,ROC曲线,训练测试样本分布比较☆11Dec 21, 2020Updated 5 years ago
- ☆17Dec 19, 2025Updated 9 months ago
- [IJCAI'23] Prompt Federated Learning for Weather Forecasting: Toward Foundation Models on Meteorological Data.☆14Oct 3, 2024Updated last year
- ☆17Feb 18, 2025Updated last year
- ☆21Oct 28, 2025Updated 10 months ago
- Identify spatial domain☆92May 29, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Official repository for Characterization of tumor heterogeneity through segmentation-free representation learning on multiplexed imaging …☆16Jul 17, 2026Updated 2 months ago
- cox loss function and c-index calculation with pytorch☆12Jun 15, 2019Updated 7 years ago
- ☆16Nov 25, 2024Updated last year
- This is the PyTorch implementation of the paper ''STINR: Deciphering Spatial Transcriptomics via Implicit Neural Representation'' (CVPR 2…☆21Mar 26, 2025Updated last year
- spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples☆34Aug 14, 2026Updated last month
- Official repository of the 2020 UHN RADCURE challenge.☆15Nov 21, 2022Updated 3 years ago
- ☆25Apr 3, 2025Updated last year