Yan98 / EGNLinks
Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction
☆18Updated 2 years ago
Alternatives and similar repositories for EGN
Users that are interested in EGN are comparing it to the libraries listed below
Sorting:
- ☆53Updated 3 years ago
- Deep learning on histopathology images.☆140Updated 4 years ago
- ☆79Updated 8 months ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆83Updated last year
- ☆13Updated 11 months ago
- PyTorch implementation of HisToGene☆52Updated 4 years ago
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆128Updated 8 months ago
- First commit☆65Updated 3 years ago
- ☆52Updated 10 months ago
- Her2 Breast Cancer Project☆92Updated 3 years ago
- A generative toolkit to translate H&E images to multiplexed IHC☆60Updated last year
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆40Updated last year
- ☆57Updated 2 years ago
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆36Updated 6 months ago
- Code from Foersch et al. (Under Construction / Development)☆38Updated 2 years ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆114Updated last year
- Code for the THItoGene☆28Updated 9 months ago
- ☆63Updated 4 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆44Updated last year
- ☆28Updated 10 months ago
- ☆19Updated 2 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆44Updated 8 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆79Updated last year
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆45Updated 9 months ago
- CEll spatial Organization-based graph convolutional network☆26Updated 2 years ago
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆38Updated last year
- MOMA☆53Updated last year
- Data and code to accompany our Nature publication☆48Updated 3 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 5 years ago
- Integrating histology and spatial transcriptomics - NeurIPS 2024☆358Updated 3 weeks ago