wangleiofficial / DSSPparserLinks
DSSPparser is an easy tool to parse dssp file, and can transform PDB format file to dssp format file by xssp,also support the tansfrom between the PDB id and dssp format, hssp format and sequence.
☆13Updated 3 years ago
Alternatives and similar repositories for DSSPparser
Users that are interested in DSSPparser are comparing it to the libraries listed below
Sorting:
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆63Updated 10 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆66Updated last month
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Mutation effects predicted from sequence co-variation☆72Updated 8 years ago
- PSIPRED Protein Secondary Structure Predictor☆58Updated 7 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆110Updated last week
- Direct coupling analysis software for protein and RNA sequences☆58Updated 6 months ago
- Evolutionary conservation estimation of residues or nucleotides☆57Updated 3 years ago
- Neural networks for deep mutational scanning data☆72Updated 8 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated 2 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆19Updated 6 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆113Updated 5 months ago
- Evolutionary velocity with protein language models☆95Updated last month
- Contact map alignment☆42Updated 5 years ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆51Updated 2 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆29Updated 11 months ago
- GTalign, high-performance protein structure alignment, superposition and search☆54Updated 5 months ago
- Detection of remote homology by comparison of protein language model representations☆61Updated last year
- Graph Network for protein-protein interface including language model features☆34Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 3 weeks ago
- ☆39Updated 7 months ago
- Deciphering protein evolution and fitness landscapes with latent space models☆37Updated 4 years ago
- Tools for annotation, processing and ML for antibody sequences☆39Updated this week
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 3 years ago
- ☆23Updated 4 years ago
- Contact map alignment☆16Updated 7 years ago
- ☆56Updated 5 months ago
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆41Updated last year