wangleiofficial / DSSPparserLinks
DSSPparser is an easy tool to parse dssp file, and can transform PDB format file to dssp format file by xssp,also support the tansfrom between the PDB id and dssp format, hssp format and sequence.
☆13Updated 2 years ago
Alternatives and similar repositories for DSSPparser
Users that are interested in DSSPparser are comparing it to the libraries listed below
Sorting:
- Mutation effects predicted from sequence co-variation☆66Updated 7 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated 2 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆44Updated 3 years ago
- A domain parser for Alphafold models☆38Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆88Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆17Updated 6 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated 6 months ago
- ☆49Updated 3 months ago
- ☆40Updated 9 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆45Updated 3 weeks ago
- ☆30Updated last year
- Direct coupling analysis software for protein and RNA sequences☆50Updated last month
- ☆36Updated this week
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- Fast protein domain structure embedding+search tool☆21Updated last month
- Contact map alignment☆16Updated 7 years ago
- Python package to manage protein structures and their annotations☆43Updated last year
- ☆25Updated last year
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆24Updated 3 months ago
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Updated last month
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago
- Tools for annotation, processing and ML for antibody sequences☆30Updated last week
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆28Updated last year
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆73Updated 2 weeks ago
- ☆19Updated 4 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated last month
- A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …☆27Updated 4 years ago
- ☆35Updated last year