Alternatives and similar repositories for DSSPparser

Users that are interested in DSSPparser are comparing it to the libraries listed below

• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆65Updated 5 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 8 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆70Updated 8 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆56Updated 3 years ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated 2 years ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆53Updated 5 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆110Updated last month
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated 2 weeks ago
• JudeWells / chainsaw
  ☆46Updated last year
• davidhoover / DNAWorks
  Automatic oligonucleotide design for PCR-based gene synthesis
  ☆50Updated last month
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 5 months ago
• SNU-CSSB / RF2-Lite
  ☆31Updated last year
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆28Updated 9 months ago
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆44Updated 2 weeks ago
• realbigws / RaptorX_Property_Fast
  RaptorX-Property: a Standalone Package for Protein Structure Property Prediction
  ☆19Updated 6 years ago
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆83Updated 10 months ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆52Updated 4 months ago
• jbloomlab / SARS-CoV-2-RBD_DMS
  Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
  ☆46Updated 3 years ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆56Updated 11 months ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆35Updated this week
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆34Updated last year
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆108Updated 3 months ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 9 months ago
• ncbi / SSDraw
  ☆85Updated last month
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆59Updated last year