wangleiofficial / DSSPparser
DSSPparser is an easy tool to parse dssp file, and can transform PDB format file to dssp format file by xssp,also support the tansfrom between the PDB id and dssp format, hssp format and sequence.
☆12Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for DSSPparser
- Mutation effects predicted from sequence co-variation☆61Updated 7 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆78Updated 8 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆48Updated 3 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆51Updated this week
- ☆46Updated 5 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆56Updated 3 years ago
- ☆29Updated 11 months ago
- Contact map alignment☆39Updated 3 years ago
- A domain parser for Alphafold models☆32Updated 11 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆30Updated 2 years ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆22Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆33Updated 2 years ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆92Updated this week
- Direct coupling analysis software for protein and RNA sequences☆47Updated last year
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆15Updated 5 years ago
- Transmembrane proteins predicted through Language Model embeddings☆30Updated 8 months ago
- 1D Feature Viewer☆42Updated last month
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆36Updated 2 months ago
- Evolutionary velocity with protein language models☆83Updated last year
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆19Updated 3 years ago
- Detection of remote homology by comparison of protein language model representations☆44Updated this week
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Updated 2 weeks ago
- Deep learning prediction of enzyme optimum pH☆25Updated 11 months ago
- ☆33Updated last month
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆37Updated 3 months ago
- ☆21Updated 5 months ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆72Updated 2 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 2 years ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆28Updated last year
- ☆63Updated last month