Alternatives and similar repositories for HGDA:

Users that are interested in HGDA are comparing it to the libraries listed below

• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆22Updated 11 months ago
• LuChenLab / inferCC
  Lung cancer 10X analysis
  ☆11Updated 4 years ago
• zgyaru / anti-PD1_ESCC
  ☆16Updated last year
• AndersonHu85 / ccRCC_multiomics
  ☆15Updated last year
• Teichlab / PanGIAtlas
  Integration of gut cell atlases
  ☆17Updated 2 months ago
• kaifuchenlab / MEBOCOST
  ☆13Updated 7 months ago
• YiLab-SC / scHolography
  ☆10Updated 8 months ago
• guangchunhan / LUAD_Code
  ☆13Updated last year
• CICAMS-Liu-lab / ECGEA
  ☆17Updated 3 years ago
• SGDDNB / GeneSwitches
  Ordering gene-expression and functional events in single-cell experiments
  ☆20Updated 10 months ago
• TheHumphreysLab / Mouse_DKD_Rx_Atlas
  ☆16Updated 2 years ago
• secrierlab / EMT
  This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.
  ☆11Updated 2 years ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆22Updated 2 years ago
• miccec / yaGST
  ☆13Updated 7 years ago
• sunnyzwu / stromal_subclasses
  code for data processing and visualisation associated with the stromal subclasses manuscript
  ☆11Updated 4 years ago
• soumelis-lab / ICELLNET
  ☆19Updated 8 months ago
• SunXQlab / scMLnet
  Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
  ☆26Updated 3 years ago
• mbourgey / scRNA_GBM
  analysis script for GBM single cell RNA seq data
  ☆17Updated 3 years ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆15Updated 4 months ago
• chriscainx / gastric-cancer
  ☆15Updated last year
• KramannLab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆19Updated 2 years ago
• ruipwang / GastricTME
  ☆15Updated last year
• ruoyan-li / RCC-spatial-mapping
  Code relating to http://dx.doi.org/10.2139/ssrn.4132721
  ☆10Updated 2 years ago
• yanailab / PanCancer
  Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…
  ☆28Updated 2 years ago
• Teichlab / Genes2Genes
  Aligning gene expression trajectories of single-cell reference and query systems
  ☆54Updated 3 months ago
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆18Updated last year
• phillipnicol / scDist
  Robust identification of perturbed cell types in single-cell RNA-seq data
  ☆29Updated 2 months ago
• SeadonXing / SSN_scRNA-seq
  The codes and files for the study of subsolid nodules (SSN).
  ☆13Updated 4 years ago
• marcalva / hcc_sc_2022
  HCC single cell analysis for Alvarez, Benhammou et al.
  ☆16Updated 2 years ago
• arc85 / singleseqgset
  Gene set enrichment analysis for single-cell RNAseq data
  ☆28Updated last year