veidenberg / wasabiLinks
Wasabi is a web-based tool for evolutionary sequence analysis. Homepage: http://wasabiapp.org
â17Updated 3 years ago
Alternatives and similar repositories for wasabi
Users that are interested in wasabi are comparing it to the libraries listed below
Sorting:
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologiesâ35Updated last year
- đś Genome assembly with short sequence readsâ25Updated last year
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classesâ31Updated last year
- Workflows I find helpful for fungal genome annotationâ21Updated 2 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.â11Updated 2 months ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)â19Updated 4 years ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxaâ25Updated 2 years ago
- Demonstrating best practices for bioinformatics command line toolsâ26Updated 5 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequencesâ24Updated last month
- Malleable All-seeing Journal Of Research Artifactsâ35Updated 2 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companionâ21Updated 4 years ago
- đ§Ź MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotationsâ34Updated last year
- Reference-guided multiple sequence alignment of viral genomesâ70Updated 3 months ago
- â18Updated 8 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomesâ35Updated 4 years ago
- Protein Alignment and Detection Interfaceâ60Updated last year
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF fâŚâ30Updated 3 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)â24Updated 4 years ago
- Prepare Sailfish and Salmon output for downstream analysisâ42Updated 6 years ago
- Useful tools for working with Salmon outputâ38Updated 5 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/â18Updated 6 years ago
- â° covtobed | Convert the coverage track from a BAM file into a BED fileâ44Updated 3 months ago
- reference free variant assemblyâ34Updated 2 years ago
- Python bindings for the TaxonKit libraryâ40Updated 2 months ago
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using pythonâ30Updated 7 years ago
- Nextflow workflow for automatic repeat detection, classification and maskingâ13Updated 7 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.â51Updated 7 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS dataâ20Updated 4 months ago
- Visualise interstrain recombination from environmental samples.â26Updated 6 years ago
- k-mer similarity analysis pipelineâ23Updated 2 months ago