Bioinformatics projects and code shared by Zhi John Lu
☆10Jun 3, 2021Updated 5 years ago
Alternatives and similar repositories for scripts
Users that are interested in scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- exRNA Biomarker Discovery for Liquid Biopsy☆11Oct 29, 2020Updated 5 years ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Nov 11, 2022Updated 3 years ago
- Lu Lab @ Tsinghua University☆19Nov 11, 2025Updated 7 months ago
- ☆11May 31, 2019Updated 7 years ago
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆22Nov 22, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆15Sep 20, 2022Updated 3 years ago
- ✂️ Trim sequencing adapters from NGS data automatically☆14Sep 5, 2025Updated 9 months ago
- DLBI: Deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy☆14May 20, 2018Updated 8 years ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆11Sep 15, 2023Updated 2 years ago
- RNA-seq data analysis practical☆62Sep 9, 2014Updated 11 years ago
- shared scripts in Lu Lab @ Tsinghua University☆14Nov 7, 2018Updated 7 years ago
- ☆10Sep 14, 2023Updated 2 years ago
- Scripts and sources of the block-based reconstruction/refinement in cryo-EM☆16May 16, 2026Updated last month
- R package for CRAG☆12Feb 17, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python Spiders☆12Dec 15, 2023Updated 2 years ago
- official repository for the UEA sRNA Workbench☆10May 31, 2023Updated 3 years ago
- Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"☆12Aug 4, 2020Updated 5 years ago
- [ECCV 2018] A2Net PyTorch implementation☆20Oct 17, 2018Updated 7 years ago
- EMBuilder is a program based on template matching for model building of high resolution cryoEM maps.☆13Mar 6, 2017Updated 9 years ago
- ☆13Jun 29, 2022Updated 4 years ago
- Comparing and combining multiple metagenomic datasets☆16Oct 12, 2022Updated 3 years ago
- Fork of https://code.google.com/p/ngs-analysis☆17Sep 14, 2013Updated 12 years ago
- 在Releases下载软件包后，使用爱思助手导入安装。☆18Apr 15, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Lennard-Jones Molecular Dynamics for beginners☆15Sep 20, 2021Updated 4 years ago
- A set of scripts and functions for analyzing MeDIP-seq datasets☆16Feb 3, 2026Updated 4 months ago
- Metal binding prediction using coevolution☆24May 19, 2024Updated 2 years ago
- ☆24Jun 7, 2024Updated 2 years ago
- De novo adapter prediction algorithm for small RNA sequencing data☆24Mar 23, 2017Updated 9 years ago
- Optimize classical force field parameters against reference data☆12Jun 18, 2026Updated last week
- Code for the analyses in the human reference interactome paper.☆28Dec 8, 2022Updated 3 years ago
- Piranha is a peak-caller for CLIP- and RIP-seq data☆20Feb 7, 2018Updated 8 years ago
- This is the pipeline of our new article "Enzyme Co-Scientist: Harnessing Large Language Models for Enzyme Kinetic Data Extraction from Li…☆17May 23, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 天津医科大学，生物医学工程与技术学院，《生物信息学》课程资料☆48Jun 2, 2023Updated 3 years ago
- Limit memory usage of R processes on POSIX systems | Obsolete, use this instead:☆25Dec 29, 2019Updated 6 years ago
- ☆25Aug 5, 2025Updated 10 months ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆24Apr 5, 2023Updated 3 years ago
- Mediated Expression Score Regression (MESC)☆28Nov 4, 2025Updated 7 months ago
- cfDNA analysis workflow☆23Jun 15, 2023Updated 3 years ago
- A novel method that quantitatively evaluates the impact of PLM in PLI predictions.☆12Sep 14, 2023Updated 2 years ago