Alternatives and similar repositories for scripts:

Users that are interested in scripts are comparing it to the libraries listed below

• WWXkenmo / Bioinfor_researchers_atlas
  ☆46Updated 2 years ago
• moss-lab / ScanFold
  ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…
  ☆17Updated 2 years ago
• kuixu / PrismNet
  Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure
  ☆61Updated 11 months ago
• tanjimin / C.Origami
  C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.
  ☆70Updated 7 months ago
• crowelab / PyIR
  Immunoglobulin and T-Cell receptor rearrangement software
  ☆47Updated last year
• xinyu-dev / igblast
  Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python
  ☆28Updated 2 years ago
• qczhang / icSHAPE
  icSHAPE pipeline
  ☆29Updated 9 years ago
• lehner-lab / DiMSum
  An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies
  ☆30Updated 2 months ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆36Updated last week
• DC-Jade / bioinfo_pi_atlas
  ☆49Updated last year
• MyungjaeSong / Paired-Library
  ☆53Updated 3 years ago
• gpp-rnd / rs3
  Package to Score Sequences using Rule Set 3
  ☆11Updated 11 months ago
• mgonzalezporta / TeachingMaterial
  RNA-seq data analysis practical
  ☆60Updated 10 years ago
• Weeks-UNC / shapemapper2
  Public repository for ShapeMapper 2 releases
  ☆32Updated 2 months ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆55Updated last month
• s175573 / DeepCAT
  Deep Learning Method to Identify Cancer Associated TCRs
  ☆45Updated 2 years ago
• jiujiezz / deephlapan
  A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…
  ☆41Updated last year
• izhangcd / DeepHF
  Core code for the DeepHF prediction tool
  ☆36Updated 5 years ago
• asncd / MIMOSCA
  A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.
  ☆87Updated 5 years ago
• Illumina / PrimateAI-3D
  ☆64Updated 7 months ago
• maxwshen / indelphi-dataprocessinganalysis
  Data Processing, Modeling and Analysis scripts for CRISPR-inDelphi
  ☆13Updated last year
• mhorlbeck / ScreenProcessing
  ☆64Updated last year
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆149Updated last month
• bernardo-de-almeida / DeepSTARR
  Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…
  ☆57Updated last year
• YeoLab / eCLIP
  ☆37Updated 2 years ago
• RTH-tools / crispron
  CRISPR Cas9 ontarget prediction software
  ☆26Updated 2 weeks ago
• kad-ecoli / python_scripts
  scripts for parsing PDB, fasta, and GO
  ☆14Updated 3 years ago
• sidhomj / DeepTCR
  Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data
  ☆115Updated 2 years ago
• UK-SBCoA-EbbertLab / brain_cDNA_discovery
  ☆12Updated last month
• brianpenghe / Bio-Jobs
  A list of positions (mostly biology-related) open to apply
  ☆34Updated 3 months ago