uhlerlab / discrepancy_vaeLinks
code for paper: Identifiability Guarantees for Causal Disentanglement from Soft Interventions
☆15Updated last year
Alternatives and similar repositories for discrepancy_vae
Users that are interested in discrepancy_vae are comparing it to the libraries listed below
Sorting:
- ☆44Updated last month
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆140Updated 8 months ago
- ☆63Updated last year
- ☆27Updated last week
- Paper collection for single cell foundation models☆32Updated last year
- a unified single-cell data integration framework by optimal transport☆35Updated 9 months ago
- ☆14Updated last week
- Gromov-Wasserstein based optimal transport for aligning single-cell multi-omics data☆73Updated last year
- Single-Cell Multimodal Prediction via Transformer☆28Updated last year
- CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure☆17Updated 9 months ago
- Predicting Cellular Responses with Variational Causal Inference and Refined Relational Information (ICLR 2023)☆19Updated last month
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆28Updated 11 months ago
- Supervised Training of Conditional Monge Maps☆18Updated last year
- A model developed for the generation of scRNA-seq data☆67Updated 4 months ago
- A simulator for single-cell expression data guided by gene regulatory networks☆63Updated last year
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆88Updated last year
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆102Updated 11 months ago
- ☆17Updated 3 years ago
- ☆13Updated 4 months ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆118Updated 5 months ago
- Models and datasets for perturbational single-cell omics☆153Updated 2 years ago
- Single-Cell (Perturbation) Model Library☆63Updated 2 weeks ago
- Single cell joint embedding and modality prediction with autoencoder☆9Updated 2 years ago
- Git Repo for simulating Boolean Models☆35Updated last year
- ☆19Updated 9 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆94Updated 3 months ago
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆71Updated last month
- ☆76Updated 3 years ago
- ☆29Updated last year
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆33Updated 2 years ago