CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure
☆16Sep 30, 2024Updated last year
Alternatives and similar repositories for CoGO
Users that are interested in CoGO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A library for the deconvolution of bulk cell samples using single-cell RNA expression data.☆23Nov 3, 2021Updated 4 years ago
- ☆13Oct 24, 2021Updated 4 years ago
- Pinterest dataset released with the paper "Learning Image and User Features for Recommendation in Social Networks" by Xue Geng et al. in …☆12Jan 4, 2023Updated 3 years ago
- ☆10Feb 12, 2019Updated 7 years ago
- ☆20May 20, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- scID☆14Oct 21, 2021Updated 4 years ago
- Deep Generative Modeling of RNA Velocity☆39Oct 21, 2025Updated 9 months ago
- Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)☆62Apr 3, 2024Updated 2 years ago
- Simulate pseudo-bulk RNAseq samples from scRNAseq expression data☆19Jul 6, 2026Updated 3 weeks ago
- ☆14Aug 18, 2023Updated 2 years ago
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Jul 19, 2019Updated 7 years ago
- An end-to-end computational pipeline for large Perturb-seq screens☆15Updated this week
- The official implementation of the paper "Asymmetric Polynomial Loss for Multi-Label Classification"(ICASSP 2023)☆20Apr 5, 2023Updated 3 years ago
- [ICLR 2025] Stem: Gene Expression Inference from Histology Images☆54Apr 15, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 3 years ago
- ☆18Sep 13, 2022Updated 3 years ago
- Vector representations of gene co-expression in single cell RNAseq.☆36Jun 7, 2026Updated last month
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆11Sep 20, 2022Updated 3 years ago
- SemI-SUpervised generative Autoencoder models for single cell data☆18Mar 30, 2021Updated 5 years ago
- BLADE: Bayesian Log-normAl DEconvolution for enhanced in silico microdissection of bulk gene expression data☆29Apr 3, 2024Updated 2 years ago
- ☆100Aug 12, 2024Updated last year
- ☆12Jul 13, 2018Updated 8 years ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆15Jun 7, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- KGANCDA is effective to predict associations between circRNA and cancer, which is based on knowledge graph attention network. The detail …☆13Dec 12, 2022Updated 3 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆100Nov 24, 2020Updated 5 years ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Jun 7, 2025Updated last year
- Implementation of AEMDA for inferring potential disease-miRNA associations.☆13Apr 13, 2021Updated 5 years ago
- CopyBench: Measuring Literal and Non-Literal Reproduction of Copyright-Protected Text in Language Model Generation☆14Aug 19, 2025Updated 11 months ago
- CeSpGRN: Inferring cell specific GRN using single-cell gene expression data☆22Mar 23, 2026Updated 4 months ago
- This is an Uncertainty Study Arxiv☆12Mar 4, 2025Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆77Feb 24, 2025Updated last year
- ☆12Feb 29, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tutorial for using the perturbseq library to load and manipulate experiments☆24Aug 7, 2019Updated 6 years ago
- A revised and cleaned version of Yu and Chen et al.'s "DAG Structure Learning with Graph Neural Networks" algorithm.☆25Apr 22, 2021Updated 5 years ago
- Pancancer survival prediction using a deep learning architecture with multimodal representation and integration☆11Feb 22, 2024Updated 2 years ago
- Implementation of some network representation methods including DeepWalk, LINE, node2vec and GraphGAN (In TensorFlow)☆22Jun 1, 2018Updated 8 years ago
- ☆15Apr 26, 2023Updated 3 years ago
- rnalib: a python-based transcriptomics library☆13Updated this week
- ☆13Jul 2, 2024Updated 2 years ago