tdseher / simple-codon-optimizerLinks
Simple Python program to perform codon optimization or heterology calculations.
☆10Updated 4 years ago
Alternatives and similar repositories for simple-codon-optimizer
Users that are interested in simple-codon-optimizer are comparing it to the libraries listed below
Sorting:
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆24Updated 2 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 4 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆28Updated last year
- ☆24Updated 2 months ago
- Evolcust retrieves groups of genes that appear clustered together in groups of species☆16Updated 2 years ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Updated 4 months ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆18Updated 4 months ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences☆14Updated 3 years ago
- ORF prediction using python☆11Updated 3 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 9 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated last month
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆16Updated 2 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 2 years ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Updated 4 years ago
- Trimming tool for Oxford Nanopore sequence data☆21Updated 4 years ago
- Ultra-fast 5' and 3' demultiplexer☆27Updated last year
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆32Updated last year
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆18Updated this week
- Nanopore Real-Time Analysis Tool☆15Updated 9 months ago
- FREE Divergence Error-Correcting DNA Barcodes☆9Updated 7 years ago
- ☆15Updated 5 years ago
- ☆16Updated last year
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated last month
- ☆9Updated 4 years ago
- Metagenome analysis using the Kraken software suite☆32Updated 2 years ago
- Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.☆17Updated 6 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago