tdseher / simple-codon-optimizer
Simple Python program to perform codon optimization or heterology calculations.
☆10Updated 3 years ago
Alternatives and similar repositories for simple-codon-optimizer:
Users that are interested in simple-codon-optimizer are comparing it to the libraries listed below
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 4 years ago
- Python bindings for the TaxonKit library☆33Updated 2 months ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆11Updated 3 weeks ago
- Tool package to perform in-silico CRISPR analysis and assessment☆23Updated 10 months ago
- PanGenomePipeline☆15Updated 10 months ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆16Updated 4 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆15Updated last week
- ORF prediction using python☆11Updated 3 years ago
- Nanopore Real-Time Analysis Tool☆15Updated 6 months ago
- Trimming tool for Oxford Nanopore sequence data☆21Updated 3 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆31Updated 9 months ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆14Updated last year
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆23Updated 3 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆8Updated 6 years ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data☆17Updated 11 months ago
- ☆24Updated 9 months ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆23Updated last year
- Automatically design multiplex PCR primer pairs for diverse templates☆23Updated 9 months ago
- Simplify snpEff annotations for interesting cases☆21Updated 6 years ago
- ☆14Updated 3 months ago
- k-mer similarity analysis pipeline☆20Updated last month
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆17Updated last week
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆21Updated 4 months ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆18Updated 4 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- finding conserved regions in highly diverse genomes☆16Updated 7 months ago
- ☆20Updated 2 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated 9 months ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆32Updated this week