PrincetonUniversity / running_gromacs
☆11Updated 3 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for running_gromacs
- Self explained tutorial for molecular dynamics simulation using gromacs☆15Updated last week
- A unified and modular interface to homology modelling software☆11Updated last year
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Updated 4 years ago
- Paper for release☆11Updated 3 years ago
- This repository is the used for teaching the Physical Chemistry Practicum about Molecular Dynamics (MD) simulations for pharmacy and biol…☆11Updated 3 years ago
- A collection of molecular modelling tools for UCSF Chimera☆17Updated 5 years ago
- ☆13Updated 3 years ago
- Printing text using protein structures☆12Updated 3 years ago
- Robust and stable clustering of molecular dynamics simulation trajectories.☆16Updated 2 years ago
- Simulation code for the prediction of RNA structures.☆10Updated 3 weeks ago
- Workshops on Computational Biology organized by our lab☆10Updated 8 months ago
- Building and analyzing residue interaction networks with cofactors (includes tutorial).☆17Updated 3 years ago
- PCA and normal mode analysis of proteins☆15Updated 6 months ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆16Updated 10 months ago
- A Python program for QM/MM Simulations based on the Perturbed Matrix Method☆24Updated last year
- 3v: Voss Volume Voxelator☆11Updated this week
- ☆13Updated last year
- a toolbox for the manipulation, modelling and analysis of molecular structures☆24Updated last month
- ☆12Updated 5 years ago
- Script to facilitate the making of horizontal scripts☆15Updated 6 months ago
- an integrated tool for molecular docking and virtual screening☆55Updated 2 months ago
- PyMOL Plugin for displaying polar contacts☆16Updated 5 years ago
- A parallel molecular docking program based on AutoDock Vina☆19Updated 6 years ago
- A step-by-step tutorial to run Molecular Dynamics Simulations with enhanced sampling of a pepitide using PLUMED implemented in GROMACS to…☆13Updated 8 months ago
- ☆9Updated last year
- Some notes (cookbook) for pyMol. Protein Crystallography course.☆15Updated 3 years ago
- MD DaVis: A python package to analyze molecular dynamics trajectories of proteins☆14Updated 7 months ago
- ☆13Updated 6 years ago
- Gromacs molecular dynamics simulation analysis scripts☆10Updated 2 years ago
- MEGADOCK on Google Colaboratory☆14Updated last year