stevenliuyi / admixLinks
an admixture analysis tool for Python that supports raw data from 23andme, AncestryDNA, etc.
☆70Updated 3 years ago
Alternatives and similar repositories for admix
Users that are interested in admix are comparing it to the libraries listed below
Sorting:
- Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to s…☆105Updated last week
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆114Updated 4 years ago
- a Medical Genetics Sequence Analysis Pipeline☆84Updated this week
- Tools for the analysis of structural variation in genomes☆81Updated last year
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆99Updated last year
- HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.☆78Updated 2 years ago
- ☆91Updated 3 years ago
- Data from the Human PanGenomics Project☆61Updated 4 years ago
- SV caller for nanopore data☆92Updated 5 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 5 years ago
- The DevNet project on github stores the PacBio DevNet website.☆116Updated 7 years ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆58Updated 2 years ago
- SALSA: A tool to scaffold long read assemblies with Hi-C data☆188Updated last year
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆69Updated 2 years ago
- A suite of tools for detecting expansions of short tandem repeats☆83Updated 2 years ago
- WisecondorX — An evolved WISECONDOR☆108Updated 2 weeks ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Updated last year
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 7 months ago
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆76Updated 5 months ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆105Updated 6 months ago
- VCF-kit: Assorted utilities for the variant call format☆132Updated 5 months ago
- A tool to genotype CYP2D6 with WGS data☆54Updated 2 years ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆82Updated 3 years ago
- AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated last week
- Tandem repeat genotyping and visualization from PacBio HiFi data☆129Updated last week
- Jasmine: SV Merging Across Samples☆232Updated 11 months ago
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes☆66Updated last month
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)☆80Updated 3 years ago