snz20 / carnelian
☆11Updated 3 years ago
Alternatives and similar repositories for carnelian:
Users that are interested in carnelian are comparing it to the libraries listed below
- ☆16Updated 6 years ago
- blast, shmlast☆21Updated 4 years ago
- Indel-aware consensus for aligned BAM☆21Updated last month
- Paint genomes with taxa-specific k-mer probabilities☆15Updated 2 years ago
- Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree☆14Updated 7 months ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 7 years ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Updated 6 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Updated last year
- Annotate your metagenome assemblies☆11Updated 6 years ago
- mSWEEP High-resolution sweep metagenomics using fast probabilistic inference☆13Updated 3 months ago
- reference free variant assembly☆32Updated last year
- Simulate mutations in genomes☆15Updated 4 years ago
- ☆19Updated 7 years ago
- Genome assembly quality improvement assisted by alternative assemblies and paired-end Illumina reads☆7Updated 6 years ago
- Mapping NCBI Genbank accession to GTDB accession☆14Updated 3 years ago
- Light version blobtools package - NO LONGER MAINTAINED! DO NOT USE!☆8Updated 9 years ago
- ☆14Updated 8 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 6 years ago
- Modular snakemake workflow for assembly-based metagenomics☆10Updated 7 years ago
- Advanced metagenomic Sequence Analysis in R☆15Updated 6 years ago
- Build sourmash databases for genbank.☆12Updated last year
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆30Updated 7 months ago
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 6 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Updated 2 months ago
- ☆15Updated 4 years ago
- ☆18Updated 9 years ago
- CAMITAX: Taxon labels for microbial genomes☆29Updated last year
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Updated 2 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- Fast in-silico normalization algorithm for NGS data☆22Updated 3 years ago