snap-stanford / platoLinks
☆69Updated last year
Alternatives and similar repositories for plato
Users that are interested in plato are comparing it to the libraries listed below
Sorting:
- BulkRNABert and MOJO☆31Updated 4 months ago
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆78Updated 4 months ago
- ☆30Updated 2 weeks ago
- ☆30Updated last year
- Code and dataset for SNP2Vec paper☆21Updated 2 years ago
- [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model☆21Updated 8 months ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆162Updated 4 years ago
- ☆73Updated last year
- A deep-learning framework for multi-omics integration☆29Updated 2 years ago
- An explainable multi-omics graph integration method based on graph convolutional networks to predict cancer genes.☆160Updated 3 years ago
- ☆80Updated 3 years ago
- Images and other data from the JUMP Cell Painting Consortium☆178Updated this week
- federated learning with tabular learning☆22Updated 8 months ago
- Contextual AI models for single-cell protein biology☆93Updated 9 months ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 3 months ago
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆36Updated 2 years ago
- Paper collection for single cell foundation models☆35Updated last year
- Comprehensive suite for evaluating perturbation prediction models☆106Updated last week
- Multi-task deep learning framework for multi-omics data analysis☆48Updated 3 years ago
- Hypergraph Factorisation☆26Updated 11 months ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆172Updated 4 years ago
- Modeling complex perturbations with CellFlow☆96Updated last week
- ☆44Updated 11 months ago
- Generating biologically informed neural networks☆52Updated 9 months ago
- ☆58Updated 4 months ago
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Updated 4 years ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆29Updated 3 months ago
- Toolkit for training hyenaDNA-based autoregressive language models on DNA sequences.☆49Updated last year
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆99Updated last year
- ☆16Updated 3 weeks ago