open-pathology / awesome-pathologyView external linksLinks
Awesome List of Digital and Computational Pathology Resources
☆103Updated this week
Alternatives and similar repositories for awesome-pathology
Users that are interested in awesome-pathology are comparing it to the libraries listed below
Sorting:
- Accurate encoding of histologic images into StyleGAN space for discovery and explainability☆13Oct 8, 2025Updated 4 months ago
- Re-stained whole slide image alignment☆36Oct 16, 2023Updated 2 years ago
- List of pathology feature extractors and foundation models☆167Updated this week
- Powerful, open-source AI tools for digital pathology.☆351Nov 13, 2025Updated 3 months ago
- Toolkit for large-scale whole-slide image processing.☆484Updated this week
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆22Oct 1, 2025Updated 4 months ago
- [NeurIPS25 D&B Spotlight] A tile-level histopathology image understanding benchmark☆40Jan 27, 2026Updated 2 weeks ago
- Vision-Language Pathology Foundation Model - Nature Medicine☆471Mar 26, 2025Updated 10 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆113Oct 15, 2024Updated last year
- Hibou: Foundational Models for Pathology☆76Oct 23, 2024Updated last year
- Pipeline for computational pathology☆37Jan 4, 2024Updated 2 years ago
- PathBench-MIL: A comprehensive, flexible Benchmarking / AutoML framework for multiple instance learning in Histopathology☆28Jan 9, 2026Updated last month
- Unsupervised Semantic Segmentation for Pathology☆17Nov 21, 2024Updated last year
- ☆128Apr 11, 2024Updated last year
- ☆17Mar 30, 2025Updated 10 months ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆265Dec 23, 2023Updated 2 years ago
- Pathology Foundation Model - Nature Medicine☆673Mar 26, 2025Updated 10 months ago
- Official Inplementation of 《WsiCaption: Multiple Instance Generation of Pathology Reports for Gigapixel Whole Slide Images》(MICCAI 2024 O…☆79Jun 6, 2025Updated 8 months ago
- ☆15Jul 8, 2024Updated last year
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆111Jun 9, 2023Updated 2 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆110Nov 8, 2025Updated 3 months ago
- Solid Tumor Associative Modeling in Pathology☆110Updated this week
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆147Feb 22, 2025Updated 11 months ago
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆116Jun 19, 2023Updated 2 years ago
- [ICCV 2023 Oral, IJCV 2025] Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification☆91Jan 7, 2026Updated last month
- Official code repository of paper HMIL: Hierarchical Multi-Instance Learning for Fine-Grained WSI Classification☆21Dec 18, 2025Updated last month
- Learning image representations for anomaly detection: application to discovery of histological alterations in drug development☆20Jan 9, 2024Updated 2 years ago
- ViLa-MIL: Dual-scale Vision-Language Multiple Instance Learning for Whole Slide Image Classification (CVPR 2024)☆97Feb 15, 2025Updated last year
- ☆31Jan 29, 2025Updated last year
- [CVPR'23] Histopathology Whole Slide Image Analysis with Heterogeneous Graph Representation Learning☆95Aug 25, 2023Updated 2 years ago
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆66Feb 18, 2025Updated 11 months ago
- ☆46Apr 12, 2023Updated 2 years ago
- Ressources of histopathology datasets☆526Nov 25, 2025Updated 2 months ago
- PrePATH: A parallel toolkit for Preprocessing WSI☆41Feb 2, 2026Updated last week
- A vision language model for gigapixel whole slide images in histopathology☆91Sep 4, 2025Updated 5 months ago
- Accessible and interoperable whole slide image analysis☆183Updated this week
- [ECCV 2024] Official Implementation of 《WSI-VQA: Interpreting Whole Slide Image by Generative Question Answering》☆59Dec 18, 2024Updated last year
- ☆29Jun 18, 2025Updated 7 months ago
- ☆53Apr 26, 2022Updated 3 years ago