open-pathology / awesome-pathologyLinks
Awesome List of Digital and Computational Pathology Resources
☆64Updated 5 months ago
Alternatives and similar repositories for awesome-pathology
Users that are interested in awesome-pathology are comparing it to the libraries listed below
Sorting:
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆80Updated last year
- Multimodal prototyping for cancer survival prediction - ICML 2024☆84Updated 4 months ago
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆134Updated 4 months ago
- Standardized benchmark for computational pathology foundation models.☆83Updated this week
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆97Updated 3 months ago
- GrandQC tool for tissue detection and quality control in pathology☆49Updated 3 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆101Updated 5 months ago
- ☆27Updated 4 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆105Updated 8 months ago
- ☆52Updated 2 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆29Updated last year
- Tools to build deep learning pipelines.☆103Updated 7 months ago
- A vision language model for gigapixel whole slide images in histopathology☆69Updated 9 months ago
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆59Updated 6 months ago
- Solid Tumor Associative Modeling in Pathology☆80Updated last week
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆53Updated 6 months ago
- ☆18Updated 6 months ago
- List of pathology feature extractors and foundation models☆131Updated 2 weeks ago
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆38Updated last month
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆57Updated 4 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆66Updated 4 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 4 months ago
- ☆35Updated 3 months ago
- Inference code for HoVer-NeXt☆35Updated 2 months ago
- ☆55Updated 3 years ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆148Updated last year
- Virtual Alignment of pathoLogy Image Series☆162Updated 6 months ago
- Encoder-Decoder Cell and Nuclei segmentation models☆92Updated last month
- Pipeline for computational pathology☆35Updated last year
- TCGA Pathology Reports in Machine Readable Text☆47Updated last year